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| 1 | Accuracy and responses of genomic selection on key traits in apple breeding显示文摘The application of genomic selection in fruit tree crops is expected to enhance breeding eficiency by increasing prediction accuracy,increasing selection intensity and decreasing generation interval.The objectives of this study were to assess the accuracy of prediction and selection response in commercial apple breeding programmes for key traits.The training population comprised 977 individuals derived from 20 pedigreed fllsib families.Historic phenotypic data were available on 10 traits related to productivity and fruit external appearance and genotypic data for 7829 SNPs obtained with an llumina 20K SNP array.From these data,a genome-wide prediction model was built and subsequently used to calculate genomic breeding values of five application fllsib families.The application families had genotypes at 364 SNPs from a dedicated 512 SNP array,and these genotypic data were extended to the high-density level by imputation.These five families were phenotyped for 1 year and their phenotypes were compared to the predicted breeding values.Accuracy of genomic prediction across the 10 traits reached a maximum value of 0.5 and had a median value of 0.19.The accuracies were strongly affected by the phenotypic distribution and heritability of traits.In the largest family,significant selection response was observed for traits with high heritability and symmetric phenotypic distribution.Traits that showed non-significant response often had reduced and skewed phenotypic variation or low heritability.Among the five application families the accuracies were uncorrelated to the degree of relatedness to the training population.The results underline the potential of genomic prediction to accelerate breeding progress in outbred fruit tree crops that still need to overcome long generation intervals and extensive phenotyping costs. | Hélène Muranty Michela Troggio Inès Ben Sadok Mehdi Al Rifaï Annemarie Auwerkerken Elisa Banchi Riccardo Velasco Piergiorgio Stevanato W.Eric van de Weg Mario Di Guardo Satish Kumar François Laurens Marco C.A.M.Bink | 2015 | Horticulture Research2015，2，1： | 14 |
| 2 | A framework infrageneric classification of Carex (Cyperaceae) and its organizing principles显示文摘Phylogenetic studies of Carex L.(Cyperaceae)have consistently demonstrated that most subgenera and sections are para-or polyphyletic.Yet,taxonomists continue to use subgenera and sections in Carex classification.Why?The Global Carex Group(GCG)here takes the position that the historical and continued use of subgenera and sections serves to(i)organize our understanding of lineages in Carex,(ii)create an identification mechanism to break the~2000 species of Carex into manageable groups and stimulate its study,and(iii)provide a framework to recognize morphologically diagnosable lineages within Carex.Unfortunately,the current understanding of phylogenetic relationships in Carex is not yet sufficient for a global reclassification of the genus within a Linnean infrageneric(sectional)framework.Rather than leaving Carex classification in its current state,which is misleading and confusing,we here take the intermediate steps of implementing the recently revised subgeneric classification and using a combination of informally named clades and formally named sections to reflect the current state of our knowledge.This hybrid classification framework is presented in an order corresponding to a linear arrangement of the clades on a ladderized phylogeny,largely based on the recent phylogenies published by the GCG.It organizes Carex into six subgenera,which are,in turn,subdivided into 62 formally named Linnean sections plus 49 informal groups.This framework will serve as a roadmap for research on Carex phylogeny,enabling further development of a complete reclassification by presenting relevant morphological and geographical information on clades where possible and standardizing the use of formal sectional names. | Eric H.Roalson Pedro Jiménez-Mejías Andrew L.Hipp Carmen Benítez-Benítez Leo P.Bruederle Kyong-Sook Chung Marcial Escudero Bruce A.Ford Kerry Ford Sebastian Gebauer Berit Gehrke Marlene Hahn Muhammad Qasim Hayat Mathias H.Hoffmann Xiao-Feng Jin Sangtae Kim Isabel Larridon Étienne Léveillé-Bourret Yi-Fei Lu Modesto Luceño Enrique Maguilla Jose IgnacioMárquez-Corro Santiago Martín-Bravo Tomomi Masaki Mónica Míguez Robert F.C.Naczi Anton A.Reznicek Daniel Spalink Julian R.Starr Uzma Tamara Villaverde Marcia J.Waterway Karen L.Wilson and Shu-Ren Zhang | 2021 | Journal of Systematics and Evolution2021，59，4： | 3 |
| 3 | Completeness of malaria notification in Tunisia assessed by capture recapture method显示文摘 | N Ben Alaya-Bouafif MK Chahed H El Bez H Bellali L Ayari N Achour | 2011 | Asian Pacific Journal of Tropical Disease2011，，3： | 2 |
| 4 | Bacteriocin-based strategies for food biopreservation显示文摘 | Antonio Gálvez Hikmate Abriouel Rosario Lucas López Nabil Ben Omar | 2007 | International Journal of Food Microbiology2007，，1： | 2 |
| 5 | Influence of the temperature on the properties of sputtered titanium oxide films显示文摘 | Ben Amor S Guedri L Baud G | 2003 | Materials Chemistry and Physics2003，77，3： | 1 |
| 6 | Contributions fromglacially derived sediment to the global iron(oxyhydroxide)cy-cle:Implications for iron delivery to the oceans显示文摘 | Raiswell R Tranter M Benning L G | 2006 | Geochimicaet Cosmochimica Acta2006，70，11： | 1 |
| 7 | Estimation of uncertainties in ICP-MS analysis:a practical methodology显示文摘 | Barwick Vicki J Stephen L R Ellison Ben Fairman | 1999 | Analytica Chimica Acta1999，，394： | 1 |
| 8 | Hydrosulphide complexing of Au (Ⅰ)in hydrothermal solutions from 150-400℃ and 500-1500 bar显示文摘 | Benning L G Seward T M | 1996 | Geochimica et Cosmochimica Acta1996，60，11： | 1 |
| 9 | Effects of different acupuncture stimula- tions on NO content in acupoint areas 显示文摘 | Ben H Rong PJ Li L | 2010 | J Tradit Chin Med2010，30，： | 1 |
| 10 | Effect of temperature on the performance of an anaerobic tubular reactor treating fruit and vegetable waste 显示文摘 | Bouallagui H Haouari O Touhami Y Ben Cheikh R Marouani L Hamdi M | 2004 | Process Biochemistry2004，39，12： | 1 |
| 11 | Cooperative communications for cognitive radio networks 显示文摘 | Ben L K and Zhang W | 2009 | Proceedings of the IEEE2009，97，5： | 1 |
| 12 | Transition from the Anodic Arc Phase to the Cathodic Metallic Arc Phase in Vacuum at Low DC Electrical LeveI显示文摘 | Ben Jemma N Morin L | 2002 | IEEE Transactions on Components Packaging Technologies2002，25，4： | 1 |
| 13 | Pulmonary function in children after neonatal meconium aspiration syndrome 显示文摘 | Djemal N Ben Ammar H Masmoudi K Reguaieg R Trigui L Ben Humad A | 2008 | Arch Pediatr2008，15，2： | 1 |
| 14 | Schwertmannite inwet,acid and oxic microenvironments beneath polar and polyther-mal glaciers显示文摘 | Raiswell R Benning L G Davidson L | 2009 | Geology2009，37，5： | 1 |
| 15 | Proteomice: capacity versus utility 显示文摘 | Jenny L Marc R Ben R | 2000 | Electrophoresis2000，21，6： | 1 |
| 16 | Influence of Air/Fuel Ratio on Cyclic Variation and Exhaust Emission in Natural Gas SI Engine显示文摘 | Ben L Dacros N R Truquet R | | SAE Paper0，1999，： | 1 |
| 17 | Self-assembled films of cellulose nanofi-bills and poly (o-ethoxyaniline) 显示文摘 | Medeiros E S Mattoso L H C Bemardes-Filho Ru- bens | 2008 | Colloid and Polymer Science2008，，286： | 1 |
| 18 | Development of a regional GPS-based ionospheric TEC model for South Africa 显示文摘 | Ben D L Opperman Pierre J Cilliers Lee-Anne McKinnell | 2007 | Advances in Space Research2007，39，： | 1 |
| 19 | Characterization of metal-cyanobactefia sorption reactions: a combined macroscopic and infrared spectroscopic investigation 显示文摘 | YEE N BENNING L G PHOENIX V R | 2004 | Environ Sci Technol2004，38，3： | 1 |
| 20 | Influence of de electric current on the hardness of thermally aged Cu-Cr-Zr alloy 显示文摘 | Wang Z J Zhong Y B Cao G H Wang C Wang J Ren W L Lei Z S Ben Z M | 2009 | Journal of Alloys and Compounds2009，479，： | 1 |
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