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| 1 | Development of genome-wide insertion/deletion markers in rice based on graphic pipeline platform显示文摘DNA markers play important roles in plant breeding and genetics.The Insertion/Deletion(InDel) marker is one kind of co-dominant DNA markers widely used due to its low cost and high precision.However,the canonical way of searching for InDel markers is time-consuming and laborintensive.We developed an end-to-end computational solution(InDel Markers Development Platform,IMDP) to identify genome-wide InDel markers under a graphic pipeline environment.IMDP constitutes assembled genome sequences alignment pipeline(AGA-pipe) and next-generation resequencing data mapping pipeline(NGS-pipe).With AGA-pipe we are able to identify 12,944 markers between the genome of rice cultivars Nipponbare and 93-11.Using NGS-pipe,we reported 34,794 InDels from re-sequencing data of rice cultivars Wu-Yun-Geng7 and Guang-Lu-Ai4.Combining AGApipe and NGS-pipe,we developed 205,659 InDels in eight japonica and nine indica cultivars and 2,681 InDels showed a subgroup-specific pattern.Polymerase chain reaction(PCR)analysis of subgroup-specific markers indicated that the precision reached 90%(86 of 95).Finally,to make them available to the public,we have integrated the InDels/markers information into a website(Rice InDel Marker Database,RIMD,http://gffzz71b3756633b74a6ehx60popf9w50c69f6.ffgz.tsg.suse.edu.cn/).The application of IMDP in rice will facilitate efficiency for development of genome-wide InDel markers,in addition it can be used in other species with reference genome sequences and NGS data. | Yang L Xiao Cui Rui Li Piaopiao Huang Jie Zong Danqing Yao Gang Li Dabing Zhang Zheng Yuan | 2015 | Journal of Integrative Plant Biology2015，57，11： | 9 |
| 2 | Metallic vanadium trioxide intercalated with phase transformation for advanced aqueous zinc-ion batteries显示文摘Aqueous zinc-ion batteries have broad application prospects due to the eco-friendliness,cost-economy and high safety.However,the scarcity of high-performance cathodes with outstanding rate capability and long lifespan has affected their development.Herein,we report a metallic vanadium trioxide material intercalated with phase transformation as cathode applied in aqueous zinc-ion batteries.It offers satisfactory electrochemical performances with a high specific capacity(435 mAh g^(-1) at 0.5 A g^(-1)),decent power density(5.23 kW kg^(-1))and desired energy density(331 Wh kg^(-1)),as well as good cyclability.The superior performance originates from the stable structure and fast Zn^(2+)diffusion,enabled by the pre-intercalation of Zn^(2+)and water molecules. | Kang Hu Danqing Jin Yao Zhang Longwei Ke Huan Shang Yan Yan Huijuan Lin Kun Rui Jixin Zhu | 2021 | Journal of Energy Chemistry2021，30，10： | 1 |
| 3 | Drosophila homolog of the intellectual disability-related long-chain acyl-CoA synthetase 4 is required for neuroblast proliferation显示文摘Mutations in long-chain acyl-CoA synthetase 4 (ACSL4) are associated with non-syndromic X-linked intellectual disability (ID). However, the neural functions of ACSL4 and how loss of ACSL4 leads to ID remain largely unexplored. We report here that mutations in Acsl, the Drosophila ortholog of human ACSL3 and ACSL4, result in developmental defects of the mushroom body (MB), the center of olfactory learning and memory. Specifically, Acsl mutants show fewer MB neuroblasts (Nbs) due to reduced proliferation activity and premature differentiation. Consistently, these surviving Nbs show reduced expression of cyclin E, a key regulator of the G1-to S-phase cell cycle transition, and nuclear mislocalization of the transcriptional factor Prospero, which is known to repress self-renewal genes and activate differentiating genes. Furthermore, RNA-seq analysis reveals downregulated Nb-and cell-cyclerelated genes and upregulated neuronal differentiation genes in Acsl mutant Nbs. As Drosophila Acsl and human ACSL4 are functionally conserved, our findings provide novel insights into a critical and previously unappreciated role of Acsl in neurogenesis and the pathogenesis of ACSL4-related ID. | Mingyue Jia Danqing Meng Mo Chen Tingting Li Yong Q.Zhang Aiyu Yao | 2019 | Journal of Genetics and Genomics2019，46，1： | 1 |
| 4 | Collagen scaffolds modified with CNTF and bFGF promote facial nerve regeneration in minipigs显示文摘 | Yi Cui Chao Lu Danqing Meng Zhifeng Xiao Xianglin Hou Wenyong Ding Depeng Kou Yao Yao Bing Chen Zhen Zhang Jiayin Li Juli Pan Jianwu Dai | 2014 | Biomaterials2014，，： | 1 |
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