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| 1 | Metabolic and Signaling Aspects Underpinning the Regulation of Plant Carbon Nitrogen Interactions显示文摘除了光和水, CO2 和矿物质元素为植物生长和开发被要求。在这些因素之中,自从综合被需要,氮是批评的氨基酸,它是蛋白质,核苷酸,叶绿素,和众多的其它的造的元素代谢物和细胞的部件。因此,氮被植物在更高的数量要求,在氮的这项投资支持生产糖,器官的酸,和氨基酸的 CO2,水,和无机的氮的使用,生物资源累积的基本积木。这个系统被复杂新陈代谢的机械维持,它根据象光, CO2,和滋养的可获得性那样的环境因素在不同层次被调整。植物经由一个发信号的网络集成这些信号,它包含代谢物以及滋养察觉到的蛋白质。由于它的重要性,许多研究努力被花费了理解碳和氮新陈代谢怎么根据光合作用, photorespiration,和呼吸的率综合、调整。在这篇文章,因此,我们两个都象在 C3 种的照亮的叶子察觉到并且发信号系统一样在碳 / 氮新陈代谢讨论最近的进展并且提供现在被要求以便带我们的理解去高水平的实验的类型的一个观点。 | Adriano Nunes-Nesi Alisdair R. Fernie Mark Stitt | 2010 | Molecular Plant2010，3，6： | 32 |
| 2 | Arabidopsis Coordinates the Diurnal Regulation of Carbon Allocation and Growth across a Wide Range of Photoperiods显示文摘在短光周期,植物在光更快积累淀粉并且降级它更慢慢地在夜里,保证他们的淀粉储备持续直到黎明。为了调查伴随,在预定生长变化, Arabidopsis 在光周期的一个范围被种并且在黎明和黄昏为插座生物资源,光合作用,呼吸,核糖体丰富,装载的 polysome,淀粉,和超过 40 代谢物分析。数据集合被用来在白天和夜里为生长率建模,并且识别与生长相关的代谢物。建模的生长率并且 polysome 装载在白天并且在在长光周期的夜里高,但是在短光周期在夜里减少了。核糖体丰富在所有光周期是类似的。淀粉的数量怎么在轻时期,夜里的长度,和维护费用积累了,被讨论交往在短光周期在夜里抑制生长,并且为优化核糖体使用改变策略。重要关联在在生长率和糖信号 trehalose 6 磷酸盐和氨基酸生合成中介 shikimate 的层次之间的白天和夜里被发现,识别象在协调生长与的一个网络的中心的这些代谢物日报在碳供应的变化。 | Ronan Sulpice Anna Flis Alexander A. Ivakov Federico Apelt Nicole Krohn Beatrice Encke Christin Abel Regina Feil John E. Lunn Mark Stitt | 2014 | Molecular Plant2014，7，1： | 8 |
| 3 | Carbon Supply and the Regulation of Cell Wa Synthesis显示文摘 | Jana Verbancic John Edward Lunn Mark Stitt Staffan Persson | 2018 | Molecular Plant2018，11，1： | 4 |
| 4 | MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis显示文摘Genome sequences from over 200 plant species have already been published, with this number expected to increase rapidly due to advances in sequencing technologies. Once a new genome has been assembled and the genes identified, the functional annotation of their putative translational products, proteins, using ontologies is of key importance as it places the sequencing data in a biological context. Furthermore, to keep pace with rapid production of genome sequences, this functional annotation process must be fully automated. Here we present a redesigned and significantly enhanced MapMan4 framework, together with a revised version of the associated online Mercator annotation tool. Compared with the original MapMan, the new ontology has been expanded almost threefold and enforces stricter assignment rules. This framework was then incorporated into Mercator4, which has been upgraded to reflect current knowledge across the land plant group, providing protein annotations for all embryophytes with a comparably high quality. The annotation process has been optimized to allow a plant genome to be annotated in a matter of minutes. The output results continue to be compatible with the established MapMan desktop application. | Rainer Schwacke Gabriel Y.Ponce-Soto Kirsten Krause Anthony M.Bolger Borjana Arsova Asis Hallab Kristina Gruden Mark Stitt Marie E.Bolger Bjorn Usadel | 2019 | Molecular Plant2019，12，6： | 2 |
| 5 | Reduced-activity mutants of phosphoglucose isomerase in the cytosol and chloroplast of Clarkia xantiana显示文摘 | H. Ekkehard Neuhaus Arthur L. Kruckeberg Regina Feil Mark Stitt | 1989 | Planta1989，，1： | 1 |
| 6 | Sucrose synthase catalyses a readily reversible reaction in vivo in developing potato tubers and other plant tissues显示文摘 | Peter Geigenberger Mark Stitt | 1993 | Planta1993，，3： | 1 |
| 7 | Trehalose metabolism in plants显示文摘 | John Edward Lunn Ines Delorge Carlos María Figueroa Patrick Van Dijck Mark Stitt | 2014 | Plant J2014，，4： | 1 |
| 8 | Nitrate regulation of metabolism and growth显示文摘 | Mark Stitt | 1999 | Current Opinion in Plant Biology1999，，3： | 1 |
| 9 | The interdependence of mechanisms underlying climate-driven vegetation mortality显示文摘 | Nate G. McDowell David J. Beerling David D. Breshears Rosie A. Fisher Kenneth F. Raffa Mark Stitt | 2011 | Trends in Ecology & Evolution2011，，10： | 1 |
| 10 | Predicting Radiation Pneumonitis After Chemoradiation Therapy for Lung Cancer: An International Individual Patient Data Meta-analysis显示文摘 | David A. Palma Suresh Senan Kayoko Tsujino Robert B. Barriger Ramesh Rengan Marta Moreno Jeffrey D. Bradley Tae Hyun Kim Sara Ramella Lawrence B. Marks Luigi De Petris Larry Stitt George Rodrigues | 2012 | International Journal of Radiation Oncology Biology Physics2012，，： | 1 |
| 11 | Carbohydrate metabolism during postharvest ripening in kiwifruit显示文摘 | Elspeth MacRae W. Paul Quick Christina Benker Mark Stitt | 1992 | Planta1992，，3： | 1 |
| 12 | Contribution of adenosine 5'-diphosphoglucose pyrophosphorylase to the control of starch synthesis is decreased by water stress in growing potato tubers 显示文摘 | PETER GEIGENBERGER BERND MULLER - ROBER MARK STITT | 1999 | Planta1999，209，： | 1 |
| 13 | Predicting Radiation Pneumonitis After Chemoradiation Therapy for Lung Cancer: An International Individual Patient Data Meta-analysis显示文摘 | David A. Palma Suresh Senan Kayoko Tsujino Robert B. Barriger Ramesh Rengan Marta Moreno Jeffrey D. Bradley Tae Hyun Kim Sara Ramella Lawrence B. Marks Luigi De Petris Larry Stitt George Rodrigues | 2012 | International Journal of Radiation Oncology Biology Physics2012，，： | 1 |
| 14 | From measurements of metabolites to metabolomics: an ‘on the fly’ perspective illustrated by recent studies of carbon–nitrogen interactions显示文摘 | Mark Stitt Alisdair R Fernie | 2003 | Current Opinion in Biotechnology2003，，2： | 1 |
| 15 | Overexpression of pyrophosphatase leads to increased sucrose degradation and starch synthesis, increased activities of enzymes for sucrose-starch interconversions, and increased levels of nucleotides in growing potato tubers显示文摘 | Peter Geigenberger Mohammad Hajirezaei Michael Geiger Uta Deiting Uwe Sonnewald Mark Stitt | 1998 | Planta1998，，3： | 1 |
| 16 | Get F-V converters to settle fast without ripple显示文摘 | Stitt R Mark Burt Rod | 1991 | Electronic Design1991，39，23： | 1 |
| 17 | Regulation of sucrose and starch metabolism in potato tubers in response to short-term water deficit显示文摘 | Peter Geigenberger Ralph Reimholz Michael Geiger Lucia Merlo Vittoria Canale Mark Stitt | 1997 | Planta1997，，4： | 1 |
| 18 | Nitrate regulation of metabolism and growth显示文摘 | STITT M MARK A | 1999 | Current Opinion in Plant Biology1999，2，3： | 1 |
| 19 | Arabidopsis thaliana plants acclimate to water deficit at low cost through changes of C usage; an integrated perspective using growth, metabolite, enzyme and gene expression analysis显示文摘 | Irene Hummel Florent Pantin Ronan Sulpice Maria Piques Ga? lie Rolland Myriam Dauzat Ang61ique Christophe Marjorie Per- vent Marie Bouteill6 Mark Stitt Yves Gibon Bertrand Muller | 2010 | Plant Physiolo- gy2010，154，： | 1 |
| 20 | Two mitochondrial phosphatases,PP2c63 and Sal2,are required for posttranslational regulation of the TCA cycle in Arabidopsis显示文摘Protein phosphorylation is a well-established post-translational mechanism that regulates protein functions and metabolic pathways.It is known that several plant mitochondrial proteins are phosphorylated in a reversible manner.However,the identities of the protein kinases/phosphatases involved in this mech-anism and their roles in the regulation of the tricarboxylic acid(TCA)cycle remain unclear.In this study,we isolated and characterized plants lacking two mitochondrially targeted phosphatases(Sal2 and PP2c63)along with pyruvate dehydrogenase kinase(PDK),Protein-protein interaction analysis,quantitative phos-phoproteomics,and enzymatic analyses revealed that PDK specifically regulates pyruvate dehydrogenase complex(PDC),while PP2c63 nonspecifically regulates PDC.When recombinant PP2c63 and Sal2 proteins were added to mitochondria isolated from mutant plants,protein-protein interaction and enzymatic analyses showed that PP2c63 directly phosphorylates and modulates the activity of PDC,while Sal2 only indirectly affects TCA cycle enzymes.Characterization of steady-state metabolite levels and fluxes in the mutant lines further revealed that these phosphatases regulate flux through the TCA cycle,and that altered metabolism in the sa/2 pp2c63 double mutant compromises plant growth.These results are discussed in the context of current models of the control of respiration in plants. | Youjun Zhang Jonas Giese Sandra M.Kerbler Beata Siemiatkowska Leonardo Perez de Souza Jessica Alpers David Barbosa Medeiros Dirk K.Hincha Danilo M.Daloso Mark Stitt Iris Finkemeier Alisdair R.Fernie | 2021 | Molecular Plant2021，14，7： | 0 |
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