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| 1 | The Hardy Rubber Tree Genome Provides Insights into the Evolution of Polyisoprene Biosynthesis显示文摘Eucommia ulmoides,也叫的强壮的橡胶树,是一棵经济地重要的树;然而,它的染色体顺序的缺乏 ?限制基本生物研究和这植物种的应用研究。这里,我们在场它的 1.2-Gb 染色体的一个高质量的集会(支架 N50 ?=? 1.88 Mb ) 与至少 26 ? 为 E 的 723 预言的基因。ulmoides,顺序 Garryales 的首先定序的染色体,它用联合定序的 Illumina 的综合策略被获得,定序的 PacBio,和印射的 BioNano。作为到 lamiids 和 campanulids 的姐妹 taxon, E。ulmoides 经历了三倍由核心 eudicots 而是没有进一步整个染色体的复制分享了的一个古老的染色体 ? 在最后 1.25 亿年里。E。ulmoides 为涉及压力回答和第二等的代谢物的生合成的多重基因展出高表达式层次或基因数字扩大,它可以说明它的可观的环境适应性。与橡胶树(Hevea brasiliensis ) 相对照,它生产 cis 聚异式戊二我烯, E。ulmoides 演变综合经由 farnesyl diphosphate synthases (FPS ) 的长链的 trans 聚异式戊二我烯。而且, FPS 和橡胶延伸 factor/small 橡胶粒子蛋白质基因家庭从 H 独立地被扩展。brasiliensis 系。这些结果提供新卓见进 E. 的生物学 ? ulmoides 和聚异式戊二我烯生合成的起源。 | Ta-na Wuyun Lin Wang Huimin Liu Xuewen Wang Liangsheng Zhang Jeffrey L. Bennetzen Tiezhu Li Lirong Yang Panfeng Liu Lanying Du Lu Wang Mengzhen Huang Jun Qing Iili Zhu Wenquan Bao Hongguo Li Qingxin Du Jingle Zhu Hong Yang Shuguang Yang Hui Liu Hui Yue Jiang Hu Suoliang Yu Yu Tian Fan Liang Jingjing Hu Depeng Wang Ruiwen Gao Dejun Li Hongyan Du | 2018 | Molecular Plant2018，11，3： | 24 |
| 2 | Modeling the Hook Depth Distribution of Pelagic Longlining in the Equatorial Area of Indian Ocean显示文摘A survey was conducted in the equatorial area of Indian Ocean for a better understanding of the dynamics of hook depth distribution of pelagic longline fishery.We determined the relationship between hook depth and vertical shear of current coefficiency,wind speed,hook position code,sine of wind angle,sine of angle of attack and weight of messenger weight.We identified the hook depth models by the analysis of covariance with a general linear model.The results showed that the wind effect on the hook depth can be ignored from October to November in the survey area;the surface current effect on the hook depth can be ignored;the equatorial undercurrent is the key factor for the hook depth in Indian Ocean;and there is a negative correlation between the hook depth and vertical shear of current and angle of attack.It was also found that the deeper the hook was set,the higher hook depth shoaling was.The proposed model improves the accuracy of the prediction of hook depth,which can be used to estimate the vertical distribution of pelagic fish in water column. | SONG Liming LI Jie GAO Panfeng ZHOU Ji XU Liuxiong | 2012 | Journal of Ocean University of China2012，11，4： | 10 |
| 3 | Fine Mapping of RppP25, a Southern Rust Resistance Gene in Maize显示文摘Southern rust (Puccinia polysora Underw.) is a major disease that can cause severe yield losses in maize (Zea mays L.). In our previous study, a major gene RppP25 that confers resistance to southern rust was identified in inbred line P25. Here, we report the fine mapping and candidate gene analysis of RppP25 from the near-isogenic line F939, which harbors RppP25 in the genetic background of the susceptible inbred line F349. The inheritance of resistance to southern rust was investigated in the BC1F1 and BC3F1 populations, which were derived from a cross between F939 and F349 (as the recurrent parent). The 1:1 segregation ratio of resistance to susceptible plants in these two populations indicated that the resistance is controlled by a single dominant gene. Ten markers, including three simple sequence repeat (SSR) markers and seven insertion/deletion (InDel) markers, were developed in the RppP25 region. RppP25 was delimited to an interval between P091 and M271, with an estimated length of 40 kb based on the physical map of B73. In this region, a candidate gene was identified that was predicted to encode a putative nucleotide-binding site leucine-rich repeat (NBS-LRR) protein. Two co-segregated markers will aid in pyramiding diverse southern rust resistance alleles into elite materials, and thereby improve southern rust resistance worldwide. | Panfeng Zhao Guobin Zhang Xiaojun Wu Na Li Dianyi Shi Dengfeng Zhang Chunfang Ji Mingliang Xu Shoucai Wang | 2013 | Journal of Integrative Plant Biology2013，55，5： | 5 |
| 4 | Extreme Temperature Change of the Last 110 Years in Changchun,Northeast China显示文摘In China and East Asia,the long-term continuous observational data at daily resolution are insufficient,and thus there is a lack of good understanding of the extreme climate variation over the last 100 years plus.In this study,the extreme temperature indices defined by ETCCDI(Expert Team on Climate Change Detection and Indices)and local meteorological administrations were analyzed for Changchun City,Northeast China,by using the daily maximum temperature(Tmax)and daily minimum temperature(Tmin)over 1909?2018.The results showed that extreme cold events,such as cold days,cold nights,frost days,icing days,and low temperature days,decreased significantly at rates of?0.41 d(10 yr)^?1,?1.45 d(10 yr)^?1,?2.28 d(10 yr)^?1,?1.16 d(10 yr)?1 and?1.90 d(10 yr)^?1,respectively.Warm nights increased significantly at a rate of 1.71 d(10 yr)^?1,but warm days decreased slightly and the number of high temperature days decreased at a rate of?0.20 d(10 yr)?1.The frequency of cold surge events increased significantly at a rate of 0.25 d(10 yr)^?1,occurring mainly from the mid-1950s to late-1980s.The average Tmax,average Tmin and extreme Tmin increased at rates of 0.09℃(10 yr)^?1,0.36℃(10 yr)^?1 and 0.54℃(10 yr)^?1,respectively;and extreme Tmax decreased significantly at a rate of?0.17℃(10 yr)^?1.In 1909?2018,1951?2018 and 1979?2018,the indices related to cold events decreased,while the trends of the indices related to warm events were different for different periods. | Xiujing YU Guoyu REN Panfeng ZHANG Jingbiao HU Ning LIU Jianping LI Chenchen ZHANG | 2020 | Advances in Atmospheric Sciences2020，37，4： | 2 |
| 5 | Turbulent mass transfer model for simulating protein desorption in liquid-solid circulating fluidized bed risers显示文摘An integrated model,namely the two-equation turbulent model,is introduced to simulate mass transfer in a liquid-solid circulating fluidized bed(LSCFB)riser.Protein desorption is simulated and the proposed model is validated.The protein concentration profiles simulated with this model agree well with published experimental results.This model enables direct determination of turbulent mass diffusivity,removing the need to empirically guess a constant turbulent Schmidt number for simulating mass transfer in a turbulent flow.This model is useful when the turbulent mass diffusivity is not available for simulating mass transfer in an LSCFB riser. | Panfeng Ren Yawen Zhang Wenbin Li Kuotsung Yu | 2021 | Particuology2021，19，4： | 2 |
| 6 | Acidolysis hydrocarbon characteristics and significance of sediment samples from the ODP drilling legs of gas hydrate显示文摘为了在 acidolysis 的意义和基础上学习,索引到中国海洋的煤气的水合物探索,自从 2006 ,从钻的腿 164 海洋和 204 节目( ODP )导出的 111 件样品在中国石油探索研究院的实验中心被分析由 PE AutoSystem XL 和同位素团分光计的煤气的层析( GC )在 acidolysis 烃索引和甲烷碳同位素上获得数据( IRMS ) Finnigan MAT251 。通过这些,我们学习 acidolysis 方法的可靠性并且描绘煤气的水合物潜力。结果证明 acidolysis 烃索引与煤气的水合物稳定性地区(GHSZ ) 有稳定的通讯在 ODP,和那在可能可靠地反映烃移植从底部水合物引起的 authigenic 碳酸盐的存在的浅样品有清楚的反常符号。我们因此建议描绘 acidolysis 烃的能力对在中国的海底的煤气的水合物探索关键。 | Xun Sun Chunyan Sun Jiangyun Xiang Jihui Jia Panfeng Li Zhibin Zhang | 2012 | Geoscience Frontiers2012，3，4： | 1 |
| 7 | An evaluation of OPTC and EPYC as candidate genes for high myopia显示文摘 | Panfeng Wang Shiqiang Li Xueshan Xiao | | 0，，： | 1 |
| 8 | Mutation spectrum and frequency of the RHO gene in 248 Chinese families with retinitis pigmentosa显示文摘 | Shiqiang Li Xueshan Xiao Panfeng Wang Xiangming Guo Qingjiong Zhang | 2010 | Biochemical and Biophysical Research Communications2010，，1： | 1 |
| 9 | Synthesis and characterization of epoxy resin modified with nano-SiO 2 and γ -glycidoxypropyltrimethoxy silane显示文摘 | Haiyan Li Zhisheng Zhang Xiaofei Ma Ming Hu Xiuyu Wang Panfeng Fan | 2006 | Surface & Coatings Technology2006，，9： | 1 |
| 10 | Effects of Gurney flaps on a NACA0012 airfoil显示文摘 | Li Yachen Wang Jinjun Zhang Panfeng | 2002 | Flow Turbulence and Combustion2002，68，1： | 1 |
| 11 | Effects of amylose and phosphate monoester on aggregation structures of heat-moisture treated potato starches显示文摘 | Binjia Zhang Yue Zhao Xiaoxi Li Panfeng Zhang Lin Li Fengwei Xie Ling Chen | 2013 | Carbohydrate Polymers2013，，： | 1 |
| 12 | A modified forward and backward reaching inverse kinematics based incremental control for space manipulators显示文摘Forward and backward reaching inverse kinematics(FABRIK)is an efficient two-stage iterative solver for inverse kinematics of spherical-joint manipulator without the calculation of Jacobian matrix.Based on FABRIK,this paper presents an incremental control scheme for a free-floating space manipulator consists of revolute joints and rigid links with the consideration of joint constraints and dynamic coupling effect.Due to the characteristics of FABRIK,it can induce large angular movements on specific joints.Apart from that,FABRIK maps three dimensional(3D)problem into two dimensional(2D)problem by a simple geometric projection.This operation can cause infinite loops in some cases.In order to overcome these issues and apply FABRIK on space manipulators,an increments allocation method is developed to constrain the angular movements as well as to re-orient the end-effector.The manipulator is re-positioned based on the momentum conservation law.Instead of pure target position tracking,the orientation control of the end-effector is also considered.Numerical simulation is performed to testify and demonstrate the effectiveness and reliability of the proposed incremental control approach. | Gangqi DONG Panfeng HUANG Yongjie WANG Rongsheng LI | 2022 | Chinese Journal of Aeronautics2022，35，12： | 1 |
| 13 | Xenopus Tbx6 mediates posterior patterning via activation of Wnt and FGF signalling显示文摘在脊椎动物, patterning 前面以后(AP ) 轴在胚胎开始期间是一个基本过程。表明小径的 Wnt 和 FGF 在调整胚胎 AP 轴的 patterning 起重要作用。鼠标 Tbx6 编码被表明了在鼠标涉及以后的织物的说明的一个抄写因素胚胎的身体。这里,我们证明那导致 morpholino XTbx6 击倒损害以后的开发,在这个过程显示 XTbx6 的要求。同时, XTbx6 功能的获得是足够的在 Xenopus 胚胎导致宫外的以后的结构。而且, XTbx6 激活 Xwnt8 和 FGF8 的表达式,它是以后的开发的二个调停人,建议 XTbx6 由调制经由 Wnt 和 FGF 发信号小径激活的以后的 patterning 的机制。房间研究(2006 ) 16:771-779。做 i:10.1038/sj .cr.7310093;出版联机 2006 年 9 月 5 日。 | Xin Lou Panfeng Fang Shuangwei Li Rui-Ying Hu Klaus-Michael Kuemer Herbert Steinbeisser Xiaoyan Ding | 2006 | Cell Research2006，16，9： | 0 |
| 14 | High transcriptome plasticity drives phosphate starvation responses in tomato显示文摘Tomato is an important vegetable crop and fluctuating available soil phosphate(Pi)level elicits several morpho-physiological responses driven by underlying molecular responses.Therefore,understanding these molecular responses at the gene and isoform levels has become critical in the quest for developing crops with improved Pi use efficiency.A quantitative time-series RNA-seq analysis was performed to decipher the global transcriptomic changes that accompany Pi starvation in tomato.Apart from changes in the expression levels of genes,there were also alterations in the expression of alternatively-spliced transcripts.Physiological responses such as anthocyanin accumulation,reactive oxygen species generation and cell death are obvious 7 days after Pi deprivation accompanied with the maximum amount of transcriptional change in the genome making it an important stage for in-depth study while studying Pi stress responses(PSR).Our study demonstrates that transcriptomic changes under Pi deficiency are dynamic and complex in tomato.Overall,our study dwells on the dynamism of the transcriptome in eliciting a response to adapt to low Pi stress and lays it bare.Findings from this study will prove to be an invaluable resource for researchers using tomato as a model for understanding nutrient deficiency. | Viswanathan Satheesh Jieqiong Zhang Jinkai Li Qiuye You Panfeng Zhao Peng Wang Mingguang Lei | 2022 | Stress Biology2022，2，1： | 0 |
| 15 | Nuclear localization of human MEIOB requires its NLS in the OB domain and interaction with SPATA22显示文摘MEIOB is a vital protein in meiotic homologous recombination and plays an indispensable role in human gametogenesis.In mammals,MEIOB and its partner SPATA22 form a heterodimer,ensuring their effective localization on single-strand DNA(ssDNA)and proper synapsis processes.Mutations in human MEIOB(hMEIOB)cause human infertility attributed to the failure of its interaction with human SPATA22(hSPATA22)and ssDNA binding.However,the detailed mechanism is still unclear.In our study,truncated or full-length hMEIOB and hSPATA22 are traced by fused expression with fluorescent proteins(i.e.,copGFP or mCherry),and the live cell imaging system is used to observe the expression and localization of the proteins.When transfected alone,hMEIOB accumulates in the cytoplasm.Interestingly,a covered NLS in the OB domain of hMEIOB is identified,which can be exposed by hSPATA22 and is necessary for the nuclear localization of hMEIOB.When hSPATA22 loses its hMEIOB interacting domain or NLS,the nuclear localization of hMEIOB is aborted.Collectively,our results prove that the NLS in the OB domain of hMEIOB and interaction with hSPATA22 are required for hMEIOB nuclear localization. | Yating Xu Zhen Chen Panfeng Wu Wei Qu Hanqing Shi Muyang Cheng Yumin Xu Tingyu Jin Cong Liu Cong Liu Yi Li Mengcheng Luo | 2023 | Acta Biochimica et Biophysica Sinica2023，55，1： | 0 |
| 16 | Sustainability evaluation for a circular maize-pig system driven by indigenous microbes:a case study in Northeast China显示文摘Sustainable agricultural development is a topic of global concern aiming at satisfying food demand of the growing population while reducing impact on environment.Circular agriculture has become a promising development pattern with the advantages of complementing environmental resources,replacing feedback from outside system,and processing waste of bottom of system,etc.This study combined economic analysis,life cycle assessment and emergy accounting to evaluate sustainability of an integrated maize-pig system(IS)driven by indigenous microbes in Northeast China,compared with separated maize and pig system(SS).IS reduced input of concentrate feed,coal,vaccines,disinfectants,fertilizer and labor by 14.35%,100%,46.11%,100%,60.1%and 60.8%driven by indigenous microbes.Economic analysis results showed that IS has 82.88%higher profit than that of SS.The sum of potential environmental impacts of IS was lower than SS for 80.65%according to lifecycle assessment.The emergy results revealed that IS performed better sustainability.Internal feedback emergy for fertilizer and local resources for maize straw increasing of IS significantly improved emergy efficiency.The reduction resulted in nonrenewable resources decreased 33.01%than that of SS,and increased renewable resources by 67.81%,which reduced environmental load ratio of IS by 60.08%of IS.Meanwhile,these factors were the primary factors generating higher sustainability of IS.Overall,the integrated maize-pig system driven by indigenous microbes in this study can effectively alleviate the problems caused by agricultural waste and promote sustainable agricultural development. | Yinan Xu Panfeng Li Youhui Gao Yueming Li Shijie Li Yunfeng Li Peng Sui Xiaofen Wang Wangsheng Gao Yuanquan Chen | 2022 | Ecosystem Health and Sustainability2022，8，1： | 0 |
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