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| 1 | Investigating species boundaries in Colletotrichum显示文摘Colletotrichum is one of the most important plant pathogenic genera that is responsible for numerous diseases which can have a profound impact on the agricultural sector.Species delineation is difficult due to a lack of distinctive phenotypic vari-ation.Therefore,in this study three different genomic approaches based on phylogenetic,evolutionary and coalescent-based methods are applied to establish robust species boundaries.The reliability of five different DNA barcodes was also assessed to provide further insights into species delineation.The ITS region can resolve the placement of taxa up to the species complex level.The GAPDH and TUB2 markers are determined to be the most informative for most complexes.However,no single marker could discriminate between species in all complexes,therefore different molecular approaches based on multi-locus datasets are recommended.This is the first study to provide an estimated divergence time for all species complexes in Colle-totrichum.The estimated divergence time for species complexes ranged between 4.8 to 32.2 MYA.Based on the high level of congruent results obtained from the different molecular approaches,a new species complex,the Colletotrichum agaves complex is introduced.This complex consists of five taxa which are characterised by the presence of straight or slightly curved conidia with obtuse apices.This study shows that coalescent approaches and multi-locus phylogeny are crucial to establish species boundaries in Colletotrichum.The taxonomic placement of three singleton taxa Colletotrichum axonopodi,C.cariniferi and C.parallelophorum is revised.We accept 248 species and provide recommendations regarding species boundaries in the graminicola-caudatum complex. | Chitrabhanu S.Bhunjun Chayanard Phukhamsakda Ruvishika S.Jayawardena Rajesh Jeewon Itthayakorn Promputtha Kevin D.Hyde | 2021 | Fungal Diversity2021，，2： | 4 |
| 2 | Families of Sordariomycetes显示文摘Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi characterized mainly by perithecial ascomata and inoperculate unitunicate asci.The class includes many important plant pathogens,as well as endophytes,saprobes,epiphytes,coprophilous and fungicolous,lichenized or lichenicolous taxa.They occur in terrestrial,freshwater and marine habitats worldwide.This paper reviews the 107 families of the class Sordariomycetes and provides a modified backbone tree based on phylogenetic analysis of four combined loci,with a maximum five representative taxa from each family,where available.This paper brings together for the first time,since Barrs’1990 Prodromus,descriptions,notes on the history,and plates or illustrations of type or representative taxa of each family,a list of accepted genera,including asexual genera and a key to these taxa of Sordariomycetes.Delineation of taxa is supported where possible by molecular data.The outline is based on literature to the end of 2015 and the Sordariomycetes now comprises six subclasses,32 orders,105 families and 1331 genera.The family Obryzaceae and Pleurotremataceae are excluded from the class. | Sajeewa S.N.Maharachchikumbura Kevin D.Hyde E.B.Gareth Jones E.H.C.McKenzie Jayarama D.Bhat Monika C.Dayarathne Shi-Ke Huang Chada Norphanphoun Indunil C.Senanayake Rekhani H.Perera Qiu-Ju Shang Yuanpin Xiao Melvina J.D’souza Sinang Hongsanan Ruvishika S.Jayawardena Dinushani A.Daranagama Sirinapa Konta Ishani D.Goonasekara Wen-Ying Zhuang Rajesh Jeewon Alan J.L.Phillips Mohamed A.Abdel-Wahab Abdullah M.Al-Sadi Ali H.Bahkali Saranyaphat Boonmee Nattawut Boonyuen Ratchadawan Cheewangkoon Asha J.Dissanayake Jichuan Kang Qi-Rui Li Jian Kui Liu Xing Zhong Liu Zuo-Yi Liu JJennifer Luangsa-ard Ka-Lai Pang Rungtiwa Phookamsak Itthayakorn Promputtha Satinee Suetrong Marc Stadler Tingchi Wen Nalin N.Wijayawardene | 2016 | Fungal Diversity2016，，4： | 3 |
| 3 | Fungal diversity notes 367-490:taxonomic and phylogenetic contributions to fungal taxa显示文摘This is a continuity of a series of taxonomic papers where materials are examined,described and novel combinations are proposed where necessary to improve our traditional species concepts and provide updates on their classification.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets(rDNA,TEF-a,RBP2 and b-Tubulin)to infer phylogenetic relationships and substantiate systematic position of taxa within appropriate ranks.Wherever new species or combinations are being proposed,we apply an integrative approach(morphological and molecular data as well as ecological features wherever applicable).Notes on 125 fungal taxa are compiled in this paper,including eight new genera,101 new species,two new combinations,one neotype,four reference specimens,new host or distribution records for eight species and one alternative morphs.The new genera introduced in this paper are Alloarthopyrenia,Arundellina,Camarosporioides,Neomassaria,Neomassarina,Neotruncatella,Paracapsulospora and Pseudophaeosphaeria.The new species are Alfaria spartii,Alloarthopyrenia italica,Anthostomella ravenna,An.thailandica,Arthrinium paraphaeospermum,Arundellina typhae,Aspergillus koreanus,Asterina cynometrae,Bertiella ellipsoidea,Blastophorum aquaticum,Cainia globosa,Camarosporioides phragmitis,Ceramothyrium menglunense,Chaetosphaeronema achilleae,Chlamydotubeufia helicospora,Ciliochorella phanericola,Clavulinopsis aurantiaca,Colletotrichum insertae,Comoclathris italica,Coronophora myricoides,Cortinarius fulvescentoideus,Co.nymphatus,Co.pseudobulliardioides,Co.tenuifulvescens,Cunninghamella gigacellularis,Cyathus pyristriatus,Cytospora cotini,Dematiopleospora alliariae,De.cirsii,Diaporthe aseana,Di.garethjonesii,Distoseptispora multiseptata,Dis.tectonae,Dis.tectonigena,Dothiora buxi,Emericellopsis persica,Gloniopsis calami,Helicoma guttulatum,Helvella floriforma,H.oblongispora,Hermatomyces subiculosa,Juncaceicola italica,Lactarius dirkii,Lentithecium unicellulare,Le.voraginesporum,Leptosphaeria cirsii,Leptosphaeria irregularis,Leptospora galii,Le.thailandica,Lindgomyces pseudomadisonensis,Lophiotrema bambusae,Lo.fallopiae,Meliola citri-maximae,Minimelanolocus submersus,Montagnula cirsii,Mortierella fluviae,Muriphaeosphaeria ambrosiae,Neodidymelliopsis ranunculi,Neomassaria fabacearum,Neomassarina thailandica,Neomicrosphaeropsis cytisi,Neo.cytisinus,Neo.minima,Neopestalotiopsis cocoe¨s,Neopestalotiopsis musae,Neoroussoella lenispora,Neotorula submersa,Neotruncatella endophytica,Nodulosphaeria italica,Occultibambusa aquatica,Oc.chiangraiensis,Ophiocordyceps hemisphaerica,Op.lacrimoidis,Paracapsulospora metroxyli,Pestalotiopsis sequoiae,Peziza fruticosa,Pleurotrema thailandica,Poaceicola arundinis,Polyporus mangshanensis,Pseudocoleophoma typhicola,Pseudodictyosporium thailandica,Pseudophaeosphaeria rubi,Purpureocillium sodanum,Ramariopsis atlantica,Rhodocybe griseoaurantia,Rh.indica,Rh.luteobrunnea,Russula indoalba,Ru.pseudoamoenicolor,Sporidesmium aquaticivaginatum,Sp.olivaceoconidium,Sp.pyriformatum,Stagonospora forlicesenensis,Stagonosporopsis centaureae,Terriera thailandica,Tremateia arundicola,Tr.guiyangensis,Trichomerium bambusae,Tubeufia hyalospora,Tu.roseohelicospora and Wojnowicia italica.New combinations are given for Hermatomyces mirum and Pallidocercospora thailandica.A neotype is proposed for Cortinarius fulvescens.Reference specimens are given for Aquaphila albicans,Leptospora rubella,Platychora ulmi and Meliola pseudosasae,while new host or distribution records are provided for Diaporthe eres,Di.siamensis,Di.foeniculina,Dothiorella iranica,Do.sarmentorum,Do.vidmadera,Helvella tinta and Vaginatispora fuckelii,with full taxonomic details.An asexual state is also reported for the first time in Neoacanthostigma septoconstrictum.This paper contributes to a more comprehensive update and improved identification of many ascomycetes and basiodiomycetes. | Kevin D.Hyde Sinang Hongsanan Rajesh Jeewon D.Jayarama Bhat Eric H.C.McKenzie E.B.Gareth Jones Rungtiwa Phookamsak Hiran A.Ariyawansa Saranyaphat Boonmee Qi Zhao Faten Awad Abdel-Aziz Mohamed A.Abdel-Wahab Supharat Banmai Putarak Chomnunti Bao-Kai Cui Dinushani A.Daranagama Kanad Das Monika C.Dayarathne Nimali Ide Silva Asha J.Dissanayake Mingkwan Doilom Anusha H.Ekanayaka Tatiana Baptista Gibertoni Aristóteles Góes-Neto Shi-Ke Huang Subashini C.Jayasiri Ruvishika S.Jayawardena Sirinapa Konta Hyang Burm Lee Wen-Jing Li Chuan-Gen Lin Jian-Kui Liu Yong-Zhong Lu Zong-Long Luo Ishara S.Manawasinghe Patinjareveettil Manimohan Ausana Mapook Tuula Niskanen Chada Norphanphoun Moslem Papizadeh Rekhani H.Perera Chayanard Phukhamsakda Christian Richter AndréL.C.Mde A.Santiago E.Ricardo Drechsler-Santos Indunil C.Senanayake Kazuaki Tanaka T.M.D.S.Tennakoon Kasun M.Thambugala Qing Tian Saowaluck Tibpromma Benjarong Thongbai Alfredo Vizzini Dhanushka N.Wanasinghe Nalin N.Wijayawardene Hai-Xia Wu Jing Yang Xiang-Yu Zeng Huang Zhang Jin-Feng Zhang Timur S.Bulgakov Erio Camporesi Ali H.Bahkali Mohammad A.Amoozegar Lidia Silva Araujo-Neta Joseph F.Ammirati Abhishek Baghela R.P.Bhatt Dimitar Bojantchev Bart Buyck Gladstone Alves da Silva Catarina Letícia Ferreira de Lima Rafael JoséVilela de Oliveira Carlos Alberto Fragoso de Souza Yu-Cheng Dai Bálint Dima Tham Thi Duong Enrico Ercole Fernando Mafalda-Freire Aniket Ghosh Akira Hashimoto Sutakorn Kamolhan Ji-Chuan Kang Samantha C.Karunarathna Paul M.Kirk Ilkka Kytovuori Angela Lantieri Kare Liimatainen Zuo-Yi Liu Xing-Zhong Liu Robert Lücking Gianfranco Medardi Peter E.Mortimer Thi Thuong Thuong Nguyen Itthayakorn Promputtha K.N.Anil Raj Mateus A.Reck Saisamorn Lumyong Seyed Abolhassan Shahzadeh-Fazeli Marc Stadler Mohammad Reza Soudi Hong-Yan Su Takumasa Takahashi Narumon Tangthirasunun Priyanka Uniyal Yong Wang Ting-Chi Wen Jian-Chu Xu Zhong-Kai Zhang Yong-Chang Zhao Jun-Liang Zhou Lin Zhu | 2016 | Fungal Diversity2016，，5： | 2 |
| 4 | The families Distoseptisporaceae fam.nov.,Kirschsteiniotheliaceae,Sporormiaceae and Torulaceae,with new species from freshwater in Yunnan Province,China显示文摘During a north–south latitudinal survey of aquatic fungi on submerged wood and herbaceous material in streams in the Asian region,we collected several hyphomycetous taxa.This paper is part of a series where we provide illustrated accounts of these taxa and place them in a natural classification in the fungi.DNA sequence based phylogenies in recent literature have shown that Dendryphion,Sporidesmium and Torula-like species are polyphyletic in the phylum Ascomycota and their taxonomyhas been problematic due to a lack of understanding of the importance of morphological characters used to delimit taxa,as well as the lack of ex-type or reference strains.Based on multi-locus phylogenies together with morphology,we propose the novel family Distoseptisporaceae(Sordariomycetes)and three novel genera Neotorula(Pleosporales,Dothideomycetes),Distoseptispora(Sordariomycetes)and Pseudosporidesmium(Sordariomycetes).In addition,Dendryphion aquaticum,D.submersum,Distoseptispora fluminicola,D.aquatica,Kirschsteiniothelia submersa,Neotorula aquatica,Sporidesmium aquaticum,S.submersum and S.fluminicola are introduced as new species.Pseudosporidesmium knawiae comb.nov.is proposed to accommodate Sporidesmium knawiae in Sordariomycetes.The polyphyletic nature of Dendryphion,Sporidesmium and Torula-like species are partially resolved,but further sampling with fresh collections and molecular data of species are needed to obtain a natural classification. | HongYan Su Kevin D.Hyde Sajeewa S.N.Maharachchikumbura Hiran A.Ariyawansa ZongLong Luo Itthayakorn Promputtha Qing Tian ChuanGen Lin QiuJu Shang YongChang Zhao HongMei Chai XiaoYing Liu Ali H.Bahkali Jayarama D.Bhat Eric H.C.McKenzie DeQun Zhou | 2016 | Fungal Diversity2016，，5： | 2 |
| 5 | Elucidation of the life cycle of the endophytic genus Muscodor and its transfer to Induratia in Induratiaceae fam. nov., based on a polyphasic taxonomic approach显示文摘Molecular phylogenetic studies of cultures derived from some specimens of plant-inhabiting Sordariomycetes using ITS,LSU,rpb2 and tub2 DNA sequence data revealed close affinities to strains of Muscodor.The taxonomy of this biotechnologi-cally important genus,which exclusively consists of endophytes with sterile mycelia that produce antibiotic volatile secondary metabolites,was based on a rather tentative taxonomic concept.Even though it was accommodated in Xylariaceae,its phylo-genetic position had so far remained obscure.Our phylogeny shows that Muscodor species have affinities to the xylarialean genera Emarcea and Induratia,which is corroborated by the fact that their sexual states produce characteristic apiospores.These data allow for the integration of Muscodor in Induratia,i.e.the genus that was historically described first.The multi-locus phylogenetic tree clearly revealed that a clade comprising Emarcea and Induratia forms a monophylum separate from representatives of Xylariaceae,for which we propose the new family Induratiaceae.Divergence time estimations revealed that Induratiaceae has been diverged from the Xylariaceae+Clypeosphaeriaceae clade at 93(69-119)million years ago(Mya)with the crown age of 61(39-85)Mya during the Cretaceous period.The ascospore-derived cultures were studied for the production of volatile metabolites,using both,dual cultures for assessment of antimicrobial effects and extensive analyses using gas chromatography coupled with mass spectrometry(GC-MS).The antimicrobial effects observed were significant,but not as strong as in the case of the previous reports on Muscodor species.The GC-MS results give rise to some doubt on the validity of the previous identification of certain volatiles.Many peaks in the GC-MS chromatograms could not be safely identified by database searches and may represent new natural products.The isolation of these compounds by preparative chromatography and their subsequent characterisation by nuclear magnetic resonance(NMR)spectroscopy or total synthesis will allow for a more concise identification of these volatiles,and they should also be checked for their individual contri-bution to the observed antibiotic effects.This will be an important prerequisite for the development of biocontrol strains. | Milan C.Samarakoon Benjarong Thongbai Kevin D.Hyde Mark Brönstrup Ulrike Beutling Christopher Lambert Andrew N.Miller Jian‑Kui(Jack)Liu Itthayakorn Promputtha Marc Stadler | 2020 | Fungal Diversity2020，，2： | 2 |
| 6 | Divergence time calibrations for ancient lineages of Ascomycota classification based on a modern review of estimations显示文摘Inaccurate taxonomic placement of fossils can lead to the accumulation of errors in molecular clock studies and their generated evolutionary lineages.There are limited fossil data that can be used in divergence time estimations.Therefore,reliable morphological characterization and taxonomical identification of fossil fungi are extremely important.Most fossils of Dothideomycetes and Sordariomycetes are from the early Cenozoic(66-23 Mya),with fewer from the late Mesozoic(174-145 Mya).However,it is hard to distinguish some fossil descriptions as photographs and illustrations are unclear;thus,the validity of using these fossils in calibrations of molecular clocks is problematic.This study brings scattered paleobiological data on selected fossil Ascomycota,using descriptions,fossil images and illustrations,coupled with recent age estimations,and taxonomic and phylogenetic affinity of extant species.As an integrated approach,this study summarizes a historical fossil outline with a reliable minimum age for 16 calibrating points viz.crown of Aigialus,Anzia,Aspergillus,Asterina,Calicium chlorosporum–C.nobile,Capnodiales,Chaenotheca,Colletotrichum,Diaporthales,Meliola,Ophiocordyceps,Microthyriales,Microthyrium,Muyocopron,Pezizomycotina and Stigmatomyces.A scheme of Ascomycota ancient lineages is also provided in order to improve divergence time estimations. | Milan C.Samarakoon Kevin D.Hyde Sinang Hongsanan Eric H.C.McKenzie Hiran A.Ariyawansa Itthayakorn Promputtha Xiang-Yu Zeng Qing Tian Jian-Kui(Jack)Liu | 2019 | Fungal Diversity2019，，3： | 1 |
| 7 | The numbers of fungi:contributions from traditional taxonomic studies and challenges of metabarcoding显示文摘The global diversity of fungi has been estimated using several different approaches.There is somewhere between 2–11 million estimated species,but the number of formally described taxa is around 150,000,a tiny fraction of the total.In this paper,we examine 12 ascomycete genera as case studies to establish trends in fungal species descriptions,and introduce new species in each genus.To highlight the importance of traditional morpho-molecular methods in publishing new species,we introduce novel taxa in 12 genera that are considered to have low species discovery.We discuss whether the species are likely to be rare or due to a lack of extensive sampling and classification.The genera are Apiospora,Bambusicola,Beltrania,Capronia,Distoseptispora,Endocalyx,Neocatenulostroma,Neodeightonia,Paraconiothyrium,Peroneutypa,Phaeoacremonium and Vanakripa.We discuss host-specificity in selected genera and compare the number of species epithets in each genus with the number of ITS(barcode)sequences deposited in GenBank and UNITE.We furthermore discuss the relationship between the divergence times of these genera with those of their hosts.We hypothesize whether there might be more species in these genera and discuss hosts and habitats that should be investigated for novel species discovery. | Chayanard Phukhamsakda Rolf Henrik Nilsson Chitrabhanu S.Bhunjun Antonio Roberto Gomes de Farias Ya-Ru Sun Subodini N.Wijesinghe Mubashar Raza Dan-Feng Bao Li Lu Saowaluck Tibpromma Wei Dong Danushka S.Tennakoon Xing-Guo Tian Yin-Ru Xiong Samantha C.Karunarathna Lei Cai Zong-Long Luo Yong Wang Ishara S.Manawasinghe Erio Camporesi Paul M.Kirk Itthayakorn Promputtha Chang-Hsin Kuo Hong-Yan Su Mingkwan Doilom Yu Li Yong-Ping Fu Kevin D.Hyde | 2022 | Fungal Diversity2022，，3： | 1 |
| 8 | A phylogenetic evaluation of whether endophytes become saprotrophs at host senescence显示文摘 | Promputtha I Lumyong S Dhanasekaran V | 2007 | Mierob Ecol2007，53，4： | 1 |
| 9 | Can leaf degrading enzymes provide evidence that endophytic fungi becoming saprobes?显示文摘 | Promputtha I Hyde K D McKenzie E H C | 2010 | Fungal Diversity2010，41，1： | 1 |
| 10 | A phylogenetic evalua-tion of whether endophytes become saprotrophs at host senescence显示文摘 | PROMPUTTHA I LUMYONG S DHANASEKARAN V HUGE E MCKENZIE C HYDE KD JEEWON R | 2007 | Microbial Ecology2007，53，： | 1 |
| 11 | A phylogenetic evaluation of whether endophytes become saprotrophs at host senescence显示文摘 | Promputtha I Lumyong S Dhanasekaran V | 2007 | Microb Ecol2007，53，4： | 1 |
| 12 | Taxonomic and phylogenetic contributions to Celtis formosana,Ficus ampelas,F.septica,Macaranga tanarius and Morus australis leaf litter inhabiting microfungi显示文摘This article provides descriptions and illustrations of microfungi associated with the leaf litter of Celtis formosana,Ficus ampelas,F.septica,Macaranga tanarius and Morus australis collected from Taiwan.These host species are native to the island and Celtis formosana is an endemic tree species.The study revealed 95 species,consisting of two new families(Cylindrohyalosporaceae and Oblongohyalosporaceae),three new genera(Cylindrohyalospora,Neodictyosporium and Oblongohyalospora),41 new species and 54 new host records.The newly described species are Acrocalymma ampeli(Acrocalymmaceae),Arthrinium mori(Apiosporaceae),Arxiella celtidis(Muyocopronaceae),Bertiella fici(Melanommataceae),Cercophora fici(Lasiosphaeriaceae),Colletotrichum celtidis,C.fici,C.fici-septicae(Glomerellaceae),Conidiocarpus ficisepticae(Capnodiaceae),Coniella fici(Schizoparmaceae),Cylindrohyalospora fici(Cylindrohyalosporaceae),Diaporthe celtidis,D.fici-septicae(Diaporthaceae),Diaporthosporella macarangae(Diaporthosporellaceae),Diplodia fici-septicae(Botryosphaeriaceae),Discosia celtidis,D.fici(Sporocadaceae),Leptodiscella sexualis(Muyocopronaceae),Leptospora macarangae(Phaeosphaeriaceae),Memnoniella alishanensis,M.celtidis,M.mori(Stachybotryaceae),Micropeltis fici,M.ficina(Micropeltidaceae),Microthyrium fici-septicae(Microthyriaceae),Muyocopron celtidis,M.ficinum,Mycoleptodiscus alishanensis(Muyocopronaceae),Neoanthostomella fici(Xylariales genera incertae sedis),Neodictyosporium macarangae(Sordariales genera incertae sedis),Neofusicoccum moracearum(Botryosphaeriaceae),Neophyllachora fici(Phyllachoraceae),Nigrospora macarangae(Apiosporaceae),Oblongohyalospora macarangae(Oblongohyalosporaceae),Ophioceras ficinum(Ophioceraceae),Parawiesneriomyces chiayiensis(Wiesneriomycetaceae),Periconia alishanica,P.celtidis(Periconiaceae),Pseudocercospora fici-septicae(Mycosphaerellaceae),Pseudoneottiospora cannabacearum(Chaetosphaeriaceae)and Pseudopithomyces mori(Didymosphaeriaceae).The new host records are Alternaria burnsii,A.pseudoeichhorniae(Pleosporaceae),Arthrinium hydei,A.malaysianum,A.paraphaeospermum,A.rasikravindrae,A.sacchari(Apiosporaceae),Bartalinia robillardoides(Sporocadaceae),Beltrania rhombica(Beltraniaceae),Cladosporium tenuissimum(Cladosporiaceae),Coniella quercicola(Schizoparmaceae),Dematiocladium celtidicola(Nectriaceae),Diaporthe limonicola,D.millettiae,D.pseudophoenicicola(Diaporthaceae),Dictyocheirospora garethjonesii(Dictyosporiaceae),Dimorphiseta acuta(Stachybotryaceae),Dinemasporium parastrigosum(Chaetosphaeriaceae),Discosia querci(Sporocadaceae),Fitzroyomyces cyperacearum(Stictidaceae),Gilmaniella bambusae(Ascomycota genera incertae sedis),Hermatomyces biconisporus(Hermatomycetaceae),Lasiodiplodia thailandica,L.theobromae(Botryosphaeriaceae),Memnoniella echinata(Stachybotryaceae),Muyocopron dipterocarpi,M.lithocarpi(Muyocopronaceae),Neopestalotiopsis asiatica,N.phangngaensis(Sporocadaceae),Ophioceras chiangdaoense(Ophioceraceae),Periconia byssoides(Periconiaceae),Pestalotiopsis dracaenea,P.formosana,P.neolitseae,P.papuana,P.parva,P.portugallica,P.trachycarpicola(Sporocadaceae),Phragmocapnias betle(Capnodiaceae),Phyllosticta capitalensis(Phyllostictaceae),Pseudopestalotiopsis camelliae-sinensis(Sporocadaceae),Pseudopithomyces chartarum,P.sacchari(Didymosphaeriaceae),Pseudorobillarda phragmitis(Pseudorobillardaceae),Robillarda roystoneae(Sporocadaceae),Sirastachys castanedae,S.pandanicola(Stachybotryaceae),S pegazzinia musae(Didymosphaeriaceae),Stachybotrys aloeticola,S.microspora(Stachybotryaceae),Strigula multiformis(Strigulaceae),Torula fici(Torulaceae),Wiesneriomyces laurinus(Wiesneriomycetaceae)and Yunnanomyces pandanicola(Sympoventuriaceae).The taxonomic placement of most taxa discussed in this study is based on morphological observation of specimens,coupled with multi-locus phylogenetic analyses of sequence data.In addition,this study provides a host-fungus database for future studies and increases knowledge of fungal diversity,as well as new fungal discoveries from the island. | Danushka S.Tennakoon Chang‑Hsin Kuo Sajeewa S.N.Maharachchikumbura Kasun M.Thambugala Eleni Gentekaki Alan J.L.Phillips D.Jayarama Bhat Dhanushka N.Wanasinghe Nimali Ide Silva Itthayakorn Promputtha Kevin D.Hyde | 2021 | Fungal Diversity2021，，3： | 1 |
| 13 | A phylogenetic evaluation of whether endophytes become saprotrophs at host senescence 显示文摘 | Promputtha I Lumyong S Dhanasekaran V | 2007 | Microbial Ecology2007，53，4： | 1 |
| 14 | A phylogenetic evaluation of whether endophytes become saprotrophs at host senescence显示文摘 | Promputtha I Lumyong S Dhanasekaran V | 2007 | Microbial Ecology2007，53，4： | 1 |
| 15 | A phylogenetic evaluation of whether endophytes become saprotrophs at host senescence显示文摘 | Promputtha I Lumyong S Dhanasekaran V | 2007 | Microbial Ecology2007，53，4： | 1 |
| 16 | A phylogenetic evaluation of whether endophytes become saprotrophs at host senescence显示文摘 | Promputtha I Lumyong S Dhanasekaran V | | 0，，04： | 1 |
| 17 | Can leaf degrading enzymes provide evidence that endophytic fungi becoming saprobes显示文摘 | Promputtha I Hyde K D McKenzie E H C | 2010 | Fungal Diversity2010，，41： | 1 |
| 18 | The Faces of Fungi database:fungal names linked with morphology,phylogeny and human impacts显示文摘Taxonomic names are key links between various databases that store information on different organisms.Several global fungal nomenclural and taxonomic databases(notably Index Fungorum,Species Fungorum and MycoBank)can be sourced to find taxonomic details about fungi,while DNA sequence data can be sourced from NCBI,EBI and UNITE databases.Although the sequence data may be linked to a name,the quality of the metadata is variable and generally there is no corresponding link to images,descriptions or herbarium material.There is generally no way to establish the accuracy of the names in these genomic databases,other than whether the submission is from a reputable source.To tackle this problem,a new database(FacesofFungi),accessible at www.facesoffungi.org(FoF)has been established.This fungal database allows deposition of taxonomic data,phenotypic details and other useful data,which will enhance our current taxonomic understanding and ultimately enable mycologists to gain better and updated insights into the current fungal classification system.In addition,the database will also allow access to comprehensive metadata including descriptions of voucher and type specimens.This database is user-friendly,providing links and easy access between taxonomic ranks,with the classification system based primarily on molecular data(from the literature and via updated web-based phylogenetic trees),and to a lesser extent on morphological data when molecular data are unavailable.In FoF species are not only linked to the closest phylogenetic representatives,but also relevant data is provided,wherever available,on various applied aspects,such as ecological,industrial,quarantine and chemical uses.The data include the three main fungal groups(Ascomycota,Basidiomycota,Basal fungi)and fungus-like organisms.The FoF webpage is an output funded by the Mushroom Research Foundation which is an NGO with seven directors with mycological expertise.The webpage has 76 curators,and with the help of these specialists,FoF will provide an updated natural classification of the fungi,with illustrated accounts of species linked to molecular data.The present paper introduces the FoF database to the scientific community and briefly reviews some of the problems associated with classification and identification of the main fungal groups.The structure and use of the database is then explained.We would like to invite all mycologists to contribute to these web pages. | Subashini C.Jayasiri Kevin D.Hyde Hiran A.Ariyawansa Jayarama Bhat Bart Buyck Lei Cai Yu-Cheng Dai Kamel A.Abd-Elsalam Damien Ertz Iman Hidayat Rajesh Jeewon E.B.Gareth Jones Ali H.Bahkali Samantha C.Karunarathna Jian-Kui Liu J.Jennifer Luangsa-ard H.Thorsten Lumbsch Sajeewa S.N.Maharachchikumbura Eric H.C.McKenzie Jean-Marc Moncalvo Masoomeh Ghobad-Nejhad Henrik Nilsson Ka-Lai Pang Olinto L.Pereira Alan J.L.Phillips Olivier Raspé Adam W.Rollins Andrea I.Romero Javier Etayo Faruk Selçuk Steven L.Stephenson Satinee Suetrong Joanne E.Taylor Clement K.M.Tsui Alfredo Vizzini Mohamed A.Abdel-Wahab Ting-Chi Wen Saranyaphat Boonmee Dong Qin Dai Dinushani A.Daranagama Asha J.Dissanayake Anusha H.Ekanayaka S.C.Fryar Sinang Hongsanan Ruvishika S.Jayawardena Wen-Jing Li Rekhani H.Perera R.Phookamsak Nimali Ide Silva Kasun M.T.hambugala Qing Tian Nalin N.Wijayawardene Rui-Lin Zhao Qi Zhao Ji-Chuan Kang Itthayakorn Promputtha | 2015 | Fungal Diversity2015，，5： | 1 |
| 19 | Towards a natural classification and backbone tree for Lophiostomataceae,Floricolaceae,and Amorosiaceae fam.nov.显示文摘The genera Lophiostoma,Misturatosphaeria and several other allied taxa in Lophiostomataceae are revisited.Accounts of these taxa,including their history,morphology,and family placement,based on molecular phylogeny,are provided.Type or representative specimens of Lophiostoma and Misturatosphaeria were examined and fresh specimens were obtained from Germany,Italy,Japan and Thailand.A multi-gene phylogenetic analysis of the lophiostomataceous genera Floricola,Lophiostoma,Misturatosphaeria and related taxa is provided.Sixteen genera including Lophiostoma,Lophiohelichrysum,Dimorphiopsis,Platystomum and Vaginatispora,plus eleven newly introduced genera Biappendiculispora,Alpestrisphaeria,Capulatispora,Coelodictyosporium,Guttulispora,Lophiopoacea,Neotrematosphaeria,Paucispora,Pseudolophiostoma,Pseudoplatystomum and Sigarispora are accepted in Lophiostomataceae based on morphology and phylogeny.Lophiostoma caulium,Lophiostoma arundinis and Lophiostoma caudatum are accommodated in Sigarispora.Lophiostoma winteri and Lophiostoma fuckelii are placed in the genera Lophiopoacea and Vaginatispora respectively.Three Curreya species and Misturatosphaeria claviformis are transferred to a new genus,Neocurreya.All other Misturatosphaeria species except Misturatosphaeria aurantiinotata and M.uniseptata are separated in the new genera Asymmetrispora,Aurantiascoma,Magnibotryascoma,Pseudoaurantiascoma and Pseudomisturatosphaeria based on their morphological and phylogenetic affinities.Another new genus,Ramusculicola is introduced for a new collection from Thailand.These seven new genera are accommodated in a new family Floricolaceae,together with Floricola and Misturatosphaeria.Several massarina-like species clustered as a sister clade to Amorosia littoralis and are accommodated in a new genus Angustimassarina.A new family Amorosiaceae is proposed to accommodate the genera Amorosia and Angustimassarina.The putatively named species Decaisnella formosa and Thyridaria macrostomoides form a separate clade together with a new genus Lignosphaeria which is placed in Dothideomycetes,genera incertae sedis. | Kasun M.Thambugala Kevin D.Hyde Kazuaki Tanaka Qing Tian Dhanushka N.Wanasinghe Hiran A.Ariyawansa Subashini C.Jayasiri Saranyaphat Boonmee Erio Camporesi Akira Hashimoto Kazuyuki Hirayama RenéK.Schumacher Itthayakorn Promputtha Zuo-Yi Liu | 2015 | Fungal Diversity2015，，5： | 1 |
| 20 | A Phylogenetic Evaluation of Weather Endophytes Become Saprotrophs at Host Senescence显示文摘 | PROMPUTTHA I LUMYONG S DHANASEKARAN V | 2007 | Microbial Ecology2007，53，： | 1 |
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