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| 1 | Beyond microbial diversity for predicting soil functions: A mini review显示文摘Since the advent of sequencing technologies,the determination of microbial diversity to predict microbial functions,which are the major determinants of soil functions,has become a major topic of interest,as evidenced by the 900 publications dealing with soil metagenome published up to 2017.However,the detection of a gene in soil does not mean that the relative function is expressed,and the presence of a particular taxon does not mean that the relative functions determined in pure culture also occur in the studied soil.Another critical step is to link microbial community composition or function to the product analyzed to determine flux rates.Indeed,flux rates might not only be highly dynamic,but several metabolites can depend on different reactions,which makes the link to one process of interest difficult or even impossible.This review also discusses biases caused by sampling,storage of samples,DNA extraction and purification,sequencing(amplicon-vs.metagenome sequencing),and bioinformatic data analysis.Insights and the limits of predicting microbial interactions by network inference methods are critically discussed,and finally,future directions for a better understanding of soil functions by using measurements of microbial diversity are presented. | Paolo NANNIPIERI Judith ASCHER-JENULL Maria Teresa CECCHERINI Giacomo PIETRAMELLARA Giancarlo RENELLA Michael SCHLOTER | 2020 | Pedosphere2020，30，1： | 5 |
| 2 | Assessment of Methods for Determining Bioavailability of Trace Elements in Soils: A Review显示文摘Trace element-contaminated soils(TECSs) are one of the consequences of the past industrial development worldwide. Excessive exposure to trace elements(TEs) represents a permanent threat to ecosystems and humans worldwide owing to the capacity of metal(loid)s to cross the cell membranes of living organisms and of human epithelia, and their interference with cell metabolism.Quantification of TE bioavailability in soils is complicated due to the polyphasic and reactive nature of soil constituents. To unravel critical factors controlling soil TE bioavailability and to quantify the ecological toxicity of TECSs, TEs are pivotal for evaluating excessive exposure or deficiencies and controlling the ecological risks. While current knowledge on TE bioavailability and related cumulative consequences is growing, the lack of an integrated use of this concept still hinders its utilization for a more holistic view of ecosystem vulnerability and risks for human health. Bioavailability is not generally included in models for decision making in the appraisal of TECS remediation options. In this review we describe the methods for determining the TE bioavailability and technological developments, gaps in current knowledge, and research needed to better understand how TE bioavailability can be controlled by sustainable TECS management altering key chemical properties, which would allow policy decisions for environmental protection and risk management. | Jurate KUMPIENE Laura GIAGNONI Bernd MARSCHNER Sébastien DENYS Michel MENCH Kristin ADRIAENSEN Jaco VANGRONSVELD Markus PUSCHENREITER Giancarlo RENELLA | 2017 | Pedosphere2017，27，3： | 3 |
| 3 | Epstein-Barr virus in brain and Ras- mussen's encephalitis显示文摘 | Walter GF Renella RR | 1989 | Lancet1989，1，8632： | 1 |
| 4 | Spondyloen- chondrodysplasia with spasticity, cerebral calcifications, and immune dysregulation: clinical and radiographic delineation of a pleiotropic disorder 显示文摘 | Renella R Schaefer E LeMerrer M | 2006 | Am J Med Genet A2006，140，6： | 1 |
| 5 | Additive effects of copper and zinc on cadmium toxicity on phosphatase activi- ties and ATP content of soil as estimated by the ecological dose (ED50)显示文摘 | Renella G Ortigoza A L R Landi L | 2003 | Soil Biol Biochem2003，35，9： | 1 |
| 6 | Assessment of zerovalent iron for stabilization of chromium, copper, and arsenic in soil 显示文摘 | Kumpiene J Ore S Renella G | 2006 | Environmental Pollution2006，144，1： | 1 |
| 7 | Fresh additions of heavy metals do not model long-term effects on microbial biomass and activity显示文摘 | Renella G Chaudri A M Brookes P C | 2002 | Soil Biology and Biochemistry2002，34，1： | 1 |
| 8 | Availability and speciation of cadmium added to a calcareous soil under various managements 显示文摘 | Renella G Adamo P Bianco M R | 2004 | Eur J Soil Sci2004，55，： | 1 |
| 9 | Secondary salinity effects on soil microbial biomass 显示文摘 | EGAMBERDIEVA D RENELLA G WIRTH S | 2010 | Biology and Fertility of Soils2010，46，5： | 1 |
| 10 | Hydrolase activities during and after the chloroform fumigation of soil as affected by protease activity显示文摘 | RENELLA G LANDI L | 2002 | Soil Biology & Biochemistry2002，34，1： | 1 |
| 11 | Additive effects of copper and zinc on cadmium toxicity on phosphatase activities and ATP content of soil as estimated by the ecological dose (ED50) 显示文摘 | Renella G Ortigoza A L R Landi L | 2003 | Soil Biology and Biochemistry2003，35，9： | 1 |
| 12 | Assessment of zerovalent iron for stabilization of chromium,copper,and arsenic in soil显示文摘 | Kumpiene J Ore S Renella G | 2006 | Environmental Pollution2006，144，： | 1 |
| 13 | Hydrolase activity, microbial biomass and community structure in long- term Cd-contaminated soils显示文摘 | Renella G Mench M D van der Lelie D | 2004 | Soil Biology & Biochemistry2004，36，3： | 1 |
| 14 | Influence of cadmium on the metabolic quotient, L : D-glutamic acid respiration ratio and enzyme activity: microbial biomass ratio under laboratory conditions 显示文摘 | Landi L Renella G Moreno J L | 2000 | Biology and Fertility of Soils2000，32，： | 1 |
| 15 | Microbial activity and hydrolase synthesis in long-term Cd- contaminated soils显示文摘 | Renella G Mench M Landi L Nannipieri P | 2005 | Soil Biology and Biochemistry2005，37，1： | 1 |
| 16 | Microbial activity and hydrolase synthesis in long-term Cd-contaminated soils显示文摘 | Renella G M Landi L Nannipieri P | 2005 | Soil Biology & Biochemistry2005，，37： | 1 |
| 17 | Secondary solinity effects on soil microbial biomass显示文摘 | Egamberdieva D Renella G Wirth S | | 0，，46： | 1 |
| 18 | Feasibility and Reproducibility of Three-Dimensional Echocardiographic Assessment of Right Ventricular Size and Function in Pediatric Patients显示文摘 | Pierangelo Renella Gerald R. Marx Jing Zhou Kimberlee Gauvreau Tal Geva | 2014 | Journal of the American Society of Echocardiography2014，，： | 1 |
| 19 | Degradation of low molecular weight organic acids complexed with heavy metals in soil显示文摘 | RENELLA G LANDI L NANNIPIERI P | 2004 | Geoderma2004，122，24： | 1 |
| 20 | Microbial activit y an dhydrolase synthesis in long- term Cd- contaminated soils显示文摘 | Renella G Mench M Landi L | 2005 | SoilBiology and Biochemistry2005，37，1： | 1 |
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