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1Sequencing of Cultivated Peanut, Arachis hypogaea, Yields Insights into Genome Evolution and Oil Improvement显示文摘Cultivated peanut (Arachis hypogaea) is an allotetraploid crop planted in Asia, Africa, and America for edible oil and protein. To explore the origins and consequences of tetraploidy, we sequenced the allotetraploid A. hypogaea genome and compared it with the related diploid Arachis duranensis and Arachis ipaensis genomes. We annotated 39 888 A-subgenome genes and 41 526 B-subgenome genes in allotetraploid peanut. The A. hypogaea subgenomes have evolved asymmetrically, with the B subgenome resembling the ancestral state and the A subgenome undergoing more gene disruption, loss, conversion, and transposable element proliferation, and having reduced gene expression during seed development despite lacking genome-wide expression dominance. Genomic and transcriptomic analyses identified more than 2 500 oil metabolism-related genes and revealed that most of them show altered expression early in seed development while their expression ceases during desiccation, presenting a comprehensive map of peanut lipid biosynthesis. The availability of these genomic resources will facilitate a better understanding of the complex genome architecture, agronomically and economically important genes, and genetic improvement of peanut.Xiaoping Chen Qing Lu Hao Liu Jianan Zhang Yanbin Hong Haofa Lan Haifen Li Jinpeng Wang Haiyan Liu Shaoxiong Li Manish K.Pandey Zhikang Zhang Guiyuan Zhou Jigao Yu Guoqiang Zhang Jiaqing Yuan Xingyu Li Shijie Wen Fanbo Meng Shanlin Yu Xiyin Wang Kadambot H.M.Siddique Zhong-Jian Liu Andrew H.Paterson Rajeev K.Varshney Xuanqiang Liang 2019Molecular Plant2019,12,7:23
2A Study of the Kunlun-Qilian-Qinling Suture System显示文摘The Late Neoproterozoic-Early Palaeozoic suture zones within theCentral Orogenic Belt of China can be considered a system-the Kunlun-Qilian-Qinling suture system (KQQ suture system). It is basically divided into the western, central and eastern sectors. The western sector consists of the Küda-Subashi suture zone, the Mazar Kangxiwar suture and the central West Kunlun microblock. The central sector covers the following five suture zones: the Altun, North Qilian, Qaidam northern marginal, Qimantag-Wutuo and East Kunlun southern marginal sutures, in addition to some microblocks such as the mid-south Qilian, Qaidam, Ayakkum and Maqen microblocks. The eastern sector is composed of the Shangdan suture zone, Mianlüe suture zone and central Qinling-Dabie microblock. The KQQ suture system experienced (1) extending-rifting of the Rodinia super-continent in the early-middle Sinian (~780-600 Ma); (2) the formation and evolution of the KQQ archipelagic ocean during the Late Sinian-Ordovician (~600-440 Ma), and (3) closing of the KQQ ocean and forming of the KQQ suture system during the Late Ordovician-early Silurian (~440-400 Ma). As a system comprising many suture zones and microblocks, the KQQ suture system consti tutes the foundation of the Central Orogenic Belt of China.CLC Number:P5 Document ID:Afoundation Item:This study was supported by the National Natural Science Foundation of China (grants 49872077 and 49572153), and the Lu Jiaxi Foundation of the Chinese Academy of Sciences.Author Resume:Bian Qiantao Born in 1945; graduated from the Department of Geology, South-Central University of Technology in 1970, and obtained his master's degree and doctor's degree at the Graduate School and the Institute of Geology, Chinese Academy of Sciences in 1981 and 1987, respectively. He is currently a professor of the Institute of Geology and Geophysics, Chinese Academy of Sciences, and has long been engaged in the research of tectonics, petrology, mineral deposits and geochemistry. Tel: (010) 62008058: E-mail:bianqt @igcas.igcas.ac.cn. 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Nd, Sr and Pb isotopic characteristics of the Proterozoic ophiolite from Songshugou area. Scientia Geologica Sinica, 33(1): 31-38 (in Chinese with English abstract).[70]Zhou Dingwu, Zhang Chengli, Liu Liang et al., 2000. Synthetic study on Proterozoic basic dyke swarms in the Qinling Orogenic Belt and its adjacent block as well as a discussion about some questions related to them. Acta Petrologica Sinica, 16(1): 22-28 (in Chinese with English abstract).[71]Zhu Yunhai, Zhang Kexin, Pan Yuanming et al., 1999. Determination of different ophiolitic belts in Eastern Kunlun orogenic zone and their tectonic significance. Earth Science, 24(2) 134-138 (in Chinese with English abstract).BIAN Qiantao, GAO Shanlin, LI Dihui, YE Zhengren, CHANG Chengfa, LUO Xiaoquan Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing 100029 Science Press, Chinese Academy of Sciences, Beijing 100717 2001Acta Geologica Sinica(English Edition)2001,75,4:19
3The influence of land use change on the spatial–temporal variability of habitat quality between 1990 and 2010 in Northeast China显示文摘Land use changes are a direct consequence of interactions between humans and nature.Analysing the spatial and temporal changes in habitat quality brought about by land use change can provide a scientific basis for ecological protection and land planning.Based on the analysis of land use change from 1990 to 2010 in Northeast China,we used the InVEST(integrated valuation of ecosystem services and trade-offs)module to evaluate habitat quality based on watershed subdivision.The results show that:(1)the main land use changes from 1990 to 2010 were the transition from grasslands and forest lands to agricultural lands,which led to a decrease in connectivity of landscape and an increase in fragmentation;(2)areas of high habitat quality were distributed north of the Greater Khingan Mountains,the region of the Lesser Khingan Mountains and east of the Changbai Mountains,while the central plain had low habitat quality;(3)agricultural lands had the largest effect on habitat degradation among all habitat threats.During these 2 decades,the contribution of agricultural lands to habitat degradation were 43.4%in 1990,44.6%in 2000 and 43.9%in 2010;and,(4)at a landscape scale,patch density and splitting index present noticeable negative correlations with habitat quality index.Habitat quality was significantly affected by landscape fragmentation and decreased connectivity.Limin Dai Shanlin Li Bernard J.Lewis Jian Wu Dapao Yu Wangming Zhou Li Zhou Shengnan Wu 2019Journal of Forestry Research2019,30,6:18
4Dynamic GM(1,1) Model Based on Cubic Spline for Electricity Consumption Prediction in Smart Grid显示文摘Electricity demand forecasting plays an important role in smart grid expansion planning.In this paper,we present a dynamic GM(1,1) model based on grey system theory and cubic spline function interpolation principle.Using piecewise polynomial interpolation thought,this model can dynamically predict the general trend of time series data.Combined with low-order polynomial,the cubic spline interpolation has smaller error,avoids the Runge phenomenon of high-order polynomial,and has better approximation effect.Meanwhile,prediction is implemented with the newest information according to the rolling and feedback mechanism and fluctuating error is controlled well to improve prediction accuracy in time-varying environment.Case study using the living electricity consumption data of Jiangsu province in 2008 is presented to demonstrate the effectiveness of the proposed model.WANG Xiaojia YANG Shanlin DING Jing WANG Haijiang 2010China Communications2010,7,4:10
5Fuzziness parameter selection in fuzzy c-means: The perspective of cluster validation显示文摘Fuzzy c-means(FCM) algorithm is an important clustering method in pattern recognition, while the fuzziness parameter, m, in FCM algorithm is a key parameter that can significantly affect the result of clustering. Cluster validity index(CVI) is a kind of criterion function to validate the clustering results, thereby determining the optimal cluster number of a data set. From the perspective of cluster validation, we propose a novel method to select the optimal value of m in FCM, and four well-known CVIs, namely XB, VK, VT, and SC, for fuzzy clustering are used. In this method, the optimal value of m is determined when CVIs reach their minimum values. Experimental results on four synthetic data sets and four real data sets have demonstrated that the range of m is [2, 3.5] and the optimal interval is [2.5, 3].ZHOU KaiLe FU Chao YANG ShanLin 2014Science China(Information Sciences)2014,57,11:9
6Engineering management for high-end equipment intelligent manufacturing显示文摘The high-end equipment intelligent manufacturing(HEIM) industry is of strategic importance to national and economic security. Engineering management(EM) for HEIM is a complex, innovative process that integrates natural science, technology, management science, social science, and the human spirit. Newgeneration information technology(IT), including the internet, cloud computing, big data, and artificial intelligence, have made a remarkable influence on HEIM and its engineering management activities, such as product system construction, product life cycle management, manufacturing resources organization, manufacturing model innovation, and reconstruction of the enterprise ecosystem.Engineering management for HEIM is a key topic at the frontier of international academic research. This study systematically reviews the current research on issues pertaining to engineering management for HEIM under the new-generation IT environment. These issues include cross-lifecycle management, network collaboration management, task integration management of innovative development, operation optimization of smart factories,quality and reliability management, information management, and intelligent decision making. The challenges presented by these issues and potential research opportunities are also summarized and discussed.Shanlin YANG Jianmin WANG Leyuan SHI Yuejin TAN Fei QIAO 2018Frontiers of Engineering Management2018,5,4:7
7Well-aligned carbon nanotube array membrane synthesized in porous alumina template by chemical vapor deposition显示文摘A new simple approach was developed for preparing well-aligned and monodispersed carbon nanotuoe (CNT) array membrane within the cylindrical pores of anodic aluminum oxide (AAO) template by chemical vapor deposition (CVD). Acetylene and hydrogen were used in the CVD process with Fe-catalyzer at 700℃ under 250 Pa. Scanning electron microscope (SEM) and transmission electron microscope (TEM) were employed to characterize the resulting highly-oriented uniform hollow tube array which had a diameter of about 250 nm, a tube density of 5.3×108cm2 and a length of about 60 μm. The length and diameter of the tubes depend on the thickness and pore diameter of the template. The growth properties of the CNT array film can be achieved by controlling the structure of the template, the particle size of Fe-catalyzer, the temperature in the reactor, the flow ratio and the deposition time. The highly-oriented and uniform CNT array membrane fabricated by this simple method is very much useful in a variety ofChengwei Wang Menke Li Shanlin Pan Hulin Li 2000Chinese Science Bulletin2000,45,15:7
8GOOD p-ARY QUASIC-CYCLIC CODES FROM CYCLIC CODES OVER F_p+vF_p显示文摘This paper introduces a Gray map from(Fp + uFp)n to Fp2n,and describes the relationship between codes over Fp + vFp and their Gray images.The authors prove that every cyclic code of arbitrary length n over Fp + vFp is principal,and determine its generator polynomial as well as the number of cyclic codes.Moreover,the authors obtain many best-known p-ary quasic-cyclic codes in terms of their parameters via the Gray map.Minjia SHI Shanlin YANG Shixin ZHU 2012Journal of Systems Science & Complexity2012,25,2:5
9Approach to Weighted Geometric Evaluation Based on Projection Pursuit显示文摘Weighted geometric evaluation approach based on Projection pursuit (PP) model is presented in this paper to optimize the choice of schemes. By using PP model, the multi-dimension evaluation index values of schemes can be synthesized into projection value with one dimension. The scheme with a bigger projection value is much better, so the schemes sample can be an optimized choice according to the projection value of each scheme. The modeling of PP based on accelerating genetic algorithm can predigest the realized process of projection pursuit technique, can overcome the shortcomings of large computation amount and the difficulty of computer programming in traditional projection pursuit methods, and can give a new method for application of projection pursuit technique to optimize choice of schemes by using weighted geometric evaluation. The analysis of an applied sample shows that applying PP model driven directly by samples data to optimize choice of schemes is both simple and feasible, that its projection values are relatively decentralized and profit decision-making, that its applicability and maneuverability are high. It can avoid the shortcoming of subjective weighing method, and its results are scientific and objective.Yang Shanlin Wang Shuo Gong Darling 2006工程科学(英文版)2006,4,1:5
10Application of blockchain in the field of intelligent manufacturing:Theoretical basis,realistic plights,and development suggestions显示文摘Blockchain technology is considered one of the promising technologies of the information technology era.The core features of blockchain,such as decentralization,transparency,high security,and tamper-proof nature,bring great convenience for large-scale social cooperation and data sharing.Blockchain has a broad application prospect in the field of intelligent manufacturing.The key issues of this field,such as distributed collaborative production,industrial big data sharing and security,transparent logistics,and supply chain,are naturally consistent with the core characteristics of the blockchain technology.This study aims to analyze the application of blockchain in the field of intelligent manufacturing.First,we introduce the basic connotation and applications of blockchain.Then,we propose the theoretical basis for the application of blockchain in the field of intelligent manufacturing.Finally,we point out the realistic plights and provide some suggestions to promote the application of blockchain in the field of intelligent manufacturing.Qiang ZHANG Baoyu LIAO Shanlin YANG 2020Frontiers of Engineering Management2020,7,4:4
11POLYNOMIAL DYNAMIC PROGRAMMING ALGORITHMS FOR LOT SIZING MODELS WITH BOUNDED INVENTORY AND STOCKOUT AND/OR BACKLOGGING显示文摘Jinhong Zhong Feng Chu Chengbin Chu Shanlin Yang 2016Journal of Systems Science and Systems Engineering2016,25,3:4
12A super pan-genomic landscape of rice显示文摘Pan-genomes from large natural populations can capture genetic diversity and reveal genomic complexity.Using de novo longread assembly,we generated a graph-based super pan-genome of rice consisting of a 251-accession panel comprising both cultivated and wild species of Asian and African rice.Our pan-genome reveals extensive structural variations(SVs)and gene presence/absence variations.Additionally,our pan-genome enables the accurate identification of nucleotide-binding leucine-rich repeat genes and characterization of their inter-and intraspecific diversity.Moreover,we uncovered grain weight-associated SVs which specify traits by affecting the expression of their nearby genes.We characterized genetic variants associated with submergence tolerance,seed shattering and plant architecture and found independent selection for a common set of genes that drove adaptation and domestication in Asian and African rice.This super pan-genome facilitates pinpointing of lineage-specific haplotypes for trait-associated genes and provides insights into the evolutionary events that have shaped the genomic architecture of various rice species.Lianguang Shang Xiaoxia Li Huiying He Qiaoling Yuan Yanni Song Zhaoran Wei Hai Lin Min Hu Fengli Zhao Chao Zhang Yuhua Li Hongsheng Gao Tianyi Wang Xiangpei Liu Hong Zhang Ya Zhang Shuaimin Cao Xiaoman Yu Bintao Zhang Yong Zhang Yiqing Tan Mao Qin Cheng Ai Yingxue Yang Bin Zhang Zhiqiang Hu Hongru Wang Yang Lv Yuexing Wang Jie Ma Quan Wang Hongwei Lu Zhe Wu Shanlin Liu Zongyi Sun Hongliang Zhang Longbiao Guo Zichao Li Yongfeng Zhou Jiayang Li Zuofeng Zhu Guosheng Xiong Jue Ruan Qian Qian 2022Cell Research2022,32,10:3
13Safety and efficacy of a nerve matrix membrane as a collagen nerve wrapping: a randomized, single-blind, multicenter clinical trial显示文摘A new nerve matrix membrane derived from decellularized porcine nerves has been shown to retain the major extracellular matrix components, and to be effective in preventing adhesion between the nerve anastomosis sites and the surrounding tissues in a rat sciatic nerve transection model, thereby enhancing regeneration of the nerve. The effectiveness of the membrane may be attributed to its various bioactive components. In this prospective, randomized, single-blind, parallel-controlled multicenter clinical trial, we compared the safety and efficacy of the new nerve matrix membrane with a previously approved bovine tendon-derived type I collagen nerve wrapping. A total of 120 patients with peripheral nerve injury were recruited from Beijing Jishuitan Hospital, The First Bethune Hospital of Jilin University, and Yantai Yuhuangding Hospital, China. The patients were randomly assigned to undergo end-to-end and tension-free neurorrhaphy with nerve matrix membrane(n = 60, 52 male, 8 female, mean age 41.34 years, experimental group) or tendon-derived collagen nerve wrapping(n = 60, 42 male, 18 female, mean age 40.17 years, control group). Patients were followed-up at 14 ± 5, 30 ± 7, 90 ± 10 and 180 ± 20 days after the operation. Safety evaluation included analyses of local and systemic reactions, related laboratory tests, and adverse reactions. Efficacy evaluation included a static 2-point discrimination test, a moving 2-point discrimination test, and a Semmes–Weinstein monofilament examination. Sensory nerve function was evaluated with the British Medical Research Council Scale and Semmes–Weinstein monofilament examination. The ratio(percentage) of patients with excellent to good results in sensory nerve recovery 180 ± 20 days after the treatment was used as the primary effectiveness index. The percentages of patients with excellent to good results in the experimental and control groups were 98.00% and 94.44%, respectively, with no significant difference between the two groups. There were no significant differences in the results of routine blood tests, liver and renal function tests, coagulation function tests, or immunoglobulin tests at 14 and 180 days postoperatively between the two groups. These findings suggest that the novel nerve matrix membrane is similar in efficacy to the commercially-available bovine-derived collagen membrane in the repair of peripheral nerve injury, and it may therefore serve as an alternative in the clinical setting. The clinical trial was approved by the Institutional Ethics Committee of Beijing Jishuitan Hospital, China(approval No. 20160902) on October 8, 2016, the Institutional Ethics Committee of the First Bethune Hospital of Jilin University, China(approval No. 160518-088) on December 14, 2016, and the Institutional Ethics Committee of Yantai Yuhuangding Hospital, China(approval No. 2016-10-01) on December 9, 2016. The clinical trial was registered with the Chinese Clinical Trial Registry(registration number: Chi CTR2000033324) on May 28, 2020.Yong-Bin Gao Zhi-Gang Liu Guo-Dong Lin Yang Guo Lei Chen Bo-Tao Huang Yao-Bin Yin Chen Yang Li-Ying Sun Yan-Bo Rong Shanlin Chen 2021Neural Regeneration Research2021,16,8:3
14On grey relation projection model based on projection pursuit显示文摘Multidimensional grey relation projection value can be synthesized as one-dimensional projection value by using projection pursuit model. The larger the projection value is,the better the model. Thus,according to the projection value,the best one can be chosen from the model aggregation. Because projection pursuit modeling based on accelerating genetic algorithm can simplify the implementation procedure of the projection pursuit technique and overcome its complex calculation as well as the difficulty in implementing its program,a new method can be obtained for choosing the best grey relation projection model based on the projection pursuit technique.Wang Shuo Yang Shanlin Ma Xijun 2008Engineering Sciences2008,6,4:3
15ON THE EQUIVALENCE OF THE ABEL EQUATION显示文摘This article uses the reflecting function of Mironenko to study some complicated differential equations which are equivalent to the Abel equation. The results are applied to discuss the behavior of solutions of these complicated differential equations.Zhang Shanlin Zhou Zhengxin (Dept. of Math., Yangzhou University, Yangzhou 225002) 2006Annals of Differential Equations2006,22,3:3
16Enhancing Nucleation and Detachment of Condensed Drops by Hybrid Wetting Surfaces显示文摘Xikui Wang Jing Zhang Jia Zeng Shanlin Wang Xinquan Yu Youfa Zhang 2018Journal of Bionic Engineering2018,15,3:2
17Incorporation of cerium in zirconolite–sphene Synroc显示文摘Shanlin Wang Yuancheng Teng Lang Wu Kuibao Zhang Xuetan Ren Hang Yang Liuyang Xu 20132013 (1-3)2013,,1:2
18Removal of naphthenic acid by microwave显示文摘Huang Mingfu Zhan Shanlin Li Ping 2006J Clean Prod2006,14,8:1
19Multi-agent-based fuzzy scheduling for shop floor显示文摘Li Ying Zheng Jiaqiang Yang Shanlin 2010International Journal of Advanced Manufacturing Technology2010,49,58:1
20Consecutive flap transfer for repairing massive soft tissue defects in the opisthenar with improved donor site closure显示文摘Wu Lehao Tong Dedi Zhu Shan Zang Mengqing Tian Guanglei Chen Shanlin 2014Chinese Journal of Traumatology2014,17,5:1
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