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| 1 | Speciation with gene flow via cycles of isolation and migration:insights from multiple mangrove taxa显示文摘Allopatric speciation requiring an unbroken period of geographical isolation has been the standard model of neo-Darwinism. While doubts have been repeatedly raised, strict allopatry without any gene flow remains a plausible mechanism in most cases. To rigorously reject strict allopatry, genomic sequences superimposed on the geological records of a well-delineated geographical barrier are necessary. The Strait of Malacca,narrowly connecting the Pacific and Indian Ocean coasts, serves at different times either as a geographical barrier or a conduit of gene flow for coastal/marine species. We surveyed 1700 plants from 29 populations of 5 common mangrove species by large-scale DNA sequencing and added several whole-genome assemblies. Speciation between the two oceans is driven by cycles of isolation and gene flow due to the fluctuations in sea level leading to the opening/closing of the Strait to ocean currents. Because the time required for speciation in mangroves is longer than the isolation phases, speciation in these mangroves has proceeded through many cycles of mixing-isolation-mixing, or MIM, cycles. The MIM mechanism, by relaxing the condition of no gene flow, can promote speciation in many more geographical features than strict allopatry can. Finally, the MIM mechanism of speciation is also efficient, potentially yielding mn(m > 1) species after n cycles. | Ziwen He Xinnian Li Ming Yang Xinfeng Wang Cairong Zhong Norman C.Duke Chung-I Wu Suhua Shi | 2019 | National Science Review2019，6，2： | 14 |
| 2 | Plant Immune Mechanisms:From Reductionistic to Holistic Points of View显示文摘After three decades of the amazing progress made on molecular studies of plant-microbe interactions(MPMI),we have begun to ask ourselves'what are the major questions still remaining?'as if the puzzle has only a few pieces missing.Such an exercise has ultimately led to the realization that we still have many more questions than answers.Therefore,it would be an impossible task for us to project a coherent'big picture'of the MPMI field in a single review.Instead,we provide our opinions on where we would like to go in our research as an invitation to the community to join us in this exploration of new MPMI frontiers. | Jie Zhang Gitta Coaker Jian-Min Zhou Xinnian Dong | 2020 | Molecular Plant2020，13，10： | 13 |
| 3 | Membrane Trafficking in Plant Immunity显示文摘植物采用复杂机制与病原以及有益的微生物交往。那些,膜 trafficking 在建立快速、精确的回答是关键的。在和病原的微生物的相互作用之上,当房间墙部件,抗菌剂混合物,和防卫蛋白质通过极化的分泌物被送到病原体侵略地点时,表面局部性的有免疫力的受体为信号 transduction 和活动规定经历 endocytosis。支撑 mutualistic 协会,也招待房间改编提供共生微生物的侵略结构的膜 trafficking 系统。这里,我们在理解角色提供最近的进展的分析能分泌并且在植物免疫者激活的 endocytic 膜 trafficking 小径。我们也讨论改编微生物部署操作这些小径破坏或禁止植物防卫的策略。 | Yangnan Gu Raul Zavaliev Xinnian Dong | 2017 | Molecular Plant2017，10，8： | 9 |
| 4 | Identification of QTLs and Validation of qCd-2 Associated with Grain Cadmium Concentrations in Rice显示文摘Cadmium(Cd) is one of heavy metals harmful to human health. As rice is the main staple food in Asia and Cd is easily contaminated in rice, the molecular regulation of Cd accumulation should be explored. In this study, a recombinant inbred population derived from Xiang 743/Katy was grown in Cd-polluted fields and used to map the quantitative trait loci(QTLs) for Cd accumulation in rice grains. We identified seven QTLs distributed on chromosomes 2, 3, 6, 7, 8 and 10. These QTLs displayed phenotypic variances of 58.50% and 40.59% in 2014 and 2015, respectively. Two QTLs, qCd-2 and qCd-7, were identified in both the two years. qCd-2 was detected on the interval of RM250–RM207 on chromosome 2, with an LOD of 2.51 and a phenotypic contribution of 13.75% in 2014, and an LOD of 3.35 and a phenotypic contribution of 14.16% in 2015. qCd-7 co-localized with the cloned qCdT7 on chromosome 7 and may represent the correct candidate. The other five QTLs were detected only in one year. To further confirm the effects of qCd-2, a residual heterozygous line designated as RHL945, with a heterozygous interval of RM263–RM207 on chromosome 2, was selected from the recombinant inbred population and used to develop an F2 population consisting of 155 individual plants. By incorporating further simple sequence repeat markers into the segmental linkage map of the target region, qCd-2 was delimited in the interval of RM5404–RM3774, with an LOD value of 4.38 and a phenotypic contribution of 15.52%. These results reflected the genetic regulation of grain Cd in rice and paved the way for the future cloning of qCd-2. | LIU Wenqiang PAN Xiaowu LI Yongchao DUAN Yonghong MIN Jun LIU Sanxiong LIU Licheng SHENG Xinnian LI Xiaoxiang | 2019 | Rice science2019，26，1： | 6 |
| 5 | Genetic analysis of fertility restoring genes for AL-type male sterility in wheat显示文摘In order to screen molecular markers linked to fertility restoring genes and further improve the breeding efficiency of restorer lines,in this study,wheat varieties 18A,18B and 99AR144-1 were used as experimental materials to establish F2 fertility-segregating population. Plant quantitative trait'major gene + polygene mixed model'separation analysis method and simple sequence repeat(SSR) molecular markers were adopted for genetic analysis of four generations,including the parents(P1 and P2),and hybrid(Fl and F2) populations. The results show that AL-type fertility restoring gene is controlled by two pairs of additive-dominant-epistatic genes and additive-dominant polygene;two primers linked to fertility restoring genes were selected by SSR molecular markers, including Xgwm95 on chromosome 2A and Barc61 on chromosome 1B,with the linkage distance of 15.0 cM and 18.0 cM,respectively. Based on verification,these two markers are reliable for distinguishing AL-type wheat sterile lines and restorer lines. | Liu Xiaofang Tian Xiaoming Nie Yingbin Mu Peiyuan Han Xinnian Sang Wei Cui Fengjuan Xu Hongjun Xiang Jishan | 2013 | Engineering Sciences2013，11，5： | 4 |
| 6 | A Highway for War and Peace: The Secretory Pathway in Plant-Microbe Interactions显示文摘蛋白质和另外的分子的分泌物是一个房间与它的环境由交往的主要工具。能分泌的系统的全面组织显著地在优核质之中被保存,并且许多在动物模型详细部件被调查了。因为他们的无柄的生活方式,植物房间特别地依赖能分泌的小径在他们的环境对变化作出回应,也不能生活例如营养素的缺席,或关於生命,例如食肉动物或病原体的存在。特别地,大多数植物病原体是细胞外的,它要求能分泌的系统在攻击的地点指导了的一位柔韧、有效的主人。这里,我们在场在我们在 plantmicrobe 相互作用期间理解能分泌的小径的分子的细节的最近的进展的一篇摘要。分泌物不仅为抗菌剂分子的交货,而且为房间表面传感器的生物的续生说被要求检测微生物。细胞外的材料的免职在对古典细菌的病原体以及在所谓的非主人抵抗的防卫是重要的。最后,增加蛋白质分泌物能力为避免感染以及为,在后者案例中完成共生是重要的,微生物在细胞内部的分隔空间被吞没。新兴的证据显示那分泌物提供在植物主机和他们的联系微生物引起的搭挡之间的一个必要接口。 | Dong Wang Xinnian Dong | 2011 | Molecular Plant2011，4，4： | 4 |
| 7 | Translational Regulation of Metabolic Dynamics during Effector-Triggered Immunity显示文摘Recent studies have shown that global translational reprogramming is an early activation event in pattern-triggered immunity,when plants recognize microbe-associated molecular patterns.However,it is not fully known whether translational regulation also occurs in subsequent immune responses,such as effector-triggered immunity(ETI).In this study,we performed genome-wide ribosome profiling in Arabidopsis upon RPS2-mediated ETI activation and discovered that specific groups of genes were translationally regulated,mostly in coordination with transcription.These genes encode enzymes involved in aromatic amino acid,phenylpropanoid,camalexin,and sphingolipid metabolism.The functional significance of these components in ETI was confirmed by genetic and biochemical analyses.Our findings provide new insights into diverse translational regulation of plant immune responses and demonstrate that translational coordination of metabolic gene expression is an important strategy for ETI. | Heejin Yoo George H.Greene Meng Yuan Guoyong Xu Derek Burton Lijing Liu Jorge Marques Xinnian Dong | 2020 | Molecular Plant2020，13，1： | 4 |
| 8 | Energy and centrality dependence of rapidity densities at RHIC energy 显示文摘 | Wang Xinnian Gyulassy Miklos | 2001 | Phys Rev Lett2001，86，： | 1 |
| 9 | Toughening of cycloaliphatic epoxy resin by nanosize silicon dioxide 显示文摘 | Xiaohua Zhang Weijian Xu Xinnian Xia | 2006 | Materials Letters2006，60，28： | 1 |
| 10 | Toughening ofcycloaliphatic epoxy resin by nanosize silicon rlioxide显示文摘 | ZHANG Xiaohua XU Weijian XIA Xinnian | 2006 | MaterialsLetters2006，，60： | 1 |
| 11 | SA, JA, ethylene, and disease resistance in plants显示文摘 | Xinnian Dong | 1998 | Current Opinion in Plant Biology1998，，4： | 1 |
| 12 | Development of simple sequence repeat markers and diversity analysis in alfalfa ( Medicago sativa L.)显示文摘 | Zan Wang Hongwei Yan Xinnian Fu Xuehui Li Hongwen Gao | 2013 | Molecular Biology Reports2013，，4： | 1 |
| 13 | A fast neutron deletion mutagenesis-based reverse genetics system for plants显示文摘 | Xin Li Yujuan Song Karen Century Shelly Straight Pamela Ronald Xinnian Dong Michael Lassner Yuelin Zhang | 2001 | The Plant Journal2001，27，3： | 1 |
| 14 | Toughening of Cycloaliphatie Epoxy Resin by Nanosize Silicon Dioxide 显示文摘 | Xiaohua Zhang Weijian Xu Xinnian Xia | 2006 | Materials Letters2006，60，28： | 1 |
| 15 | Synthesis and characterization ofo novel cycloaliphatic epoxy resin starting from dicyclopentadiene显示文摘 | Xiaohua Zhang Zhenghua zhang Xinnian Xia | 2007 | European Polynaer Journal2007，43，： | 1 |
| 16 | Genetic dissection of systemic acquired resistance显示文摘 | Xinnian Dong | 2001 | Current Opinion in Plant Biology2001，，4： | 1 |
| 17 | SENSITIVITY ANALYSIS OF HYDRAULIC GEOMETRY显示文摘A sensitivity analysis of the influence of three parameters on the hydraulic geometry of a hypothetical stable straight channel based on a geometric model was performed. With the exception of one of the parameters to be tested the input variables were held constant. The dependent variables of the hydraulic geometry dimensions and profile shapes were free to dynamically adjust themselves to the required equilibrium configuration. The b sensitivity analysis results show that three independent parameters have a strong effects to the dependent geometric | CAO Shuyou, This research was supported financially by the Foundation for Scholars Return from Abroad of State Educational Committee and the National Natural Science Foundation of China (grant number 59679010). LIU Xinnian Professors, State Key Hydraulic | 1997 | International Journal of Sediment Research1997，12，3： | 1 |
| 18 | New phytoecdysteroids from cultured plants of Ajuga nipponensis Makino显示文摘 | Josep Coll Yudelsy A. Tandrón Xinnian Zeng | 2006 | Steroids2006，，： | 1 |
| 19 | In vivo interaction between NPR1 and transcription factor TGA2 leads to salicylic acid mediated gene activation in Arabidopsis显示文摘 | Fan Weihe Dong Xinnian | 2002 | Plant Cell2002，14，： | 1 |
| 20 | Genetic interactions of TGA transcription factors in the regulation of pathogenesis-related genes and disease resistance in Arabidopsis显示文摘 | Kesarwani M Yoo J Dong xinnian | 2007 | Plant Physiology2007，144，： | 1 |
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