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| 1 | SHRIMP zircon U-Pb dating for subduction-related gran-itic rocks in the northern part of east Junggar, Xinjiang显示文摘SHRIMP U-Pb zircon dating on the Xileketehalasu granodiorite porphyry and Kalasayi monodiorite porphyry that intrude middle Devonian Beitashan Formation at the north part of east Junggar region shows that they were formed at 381±6 Ma and 376±10 Ma respectively. They are interpreted as subduction-related granitic rocks, which is the first report that the isotopic ages for the granitic rocks range from 350 to 390 Ma. Another determined age for the Kalasayi monodiorite porphyry is 408±9 Ma, representing the age of underlain Lower Devonian volcanic rocks. Thus, the U-Pb dates suggest that the northeastward subduction of Junggar ocean from southwest occurred at 408 to 376 Ma (the real inter- val may be larger). Because the ore-bearing porphyry intruded following the formation of the volcanic rocks of middle Devonian Beitashan Formation, their tec- tonic setting is similar to the Andes Mountains that hosts world-class porphyry copper deposits, and the researched area could be regarded as a potential area for prospecting large porphyry copper deposits. | ZHANG Zhaochong YAN Shenghao CHEN Bailin ZHOU Gang HE Yongkang CHAI Fengmei HE Lixin WAN Yusheng | 2006 | Chinese Science Bulletin2006，51，8： | 43 |
| 2 | Post-Mesozoic Transformation of Tectonic Domain in Southeastern China and Its Geodynamic Mechanism显示文摘Since the Mesozoic and Cenozoic, a transformation from a Tethyan Himalayan tectonic domain into a circum Pacific tectonic domain from Indosinian to Yanshanian is indicated in this paper, resulting in conspicuous changes in geophysics, tectono magmatic distribution, lithofacies and paleo geography, tectonic system in southeastern China. Tectonic analysis shows that the tectonic framework resulted from the compounding, transforming and superimposing of the two tectonic domains. The geodynamic mechanism of the transformation is mainly shown as the transverse and longitudinal heterogeneity of lithosphere, and the exchange between the crust and the mantle. | Wu Ganguo Zhang Da Faculty of Earth Sciences and Mineral Resources, China University of Geosciences, Beijing 100083, China Chen Bailin Institute of Geomechanics, CAGS, Beijing 100081, China Wu Jianshe Institute of Geological Survey of Fujian Pr | 2000 | Journal of Earth Science2000，19，3： | 12 |
| 3 | A novel preparation of nanosized hexagonal Mg(OH)2 as a flame retardant显示文摘 | Yongbin Chen Tao Zhou Huaxiong Fang Simin Li Yuting Yao Bailin Fan Jian Wang | 2016 | Particuology2016，14，1： | 10 |
| 4 | Upper Yellow River air concentrations of organochlorine pesticides estimated from tree bark, and their relationship with socioeconomic indices显示文摘Organochlorine pesticide(OCP) concentrations in tree bark from the upper Yellow River region were determined. Total OCP concentrations ranged from 2.7 to 82 ng/g dw, with a mean of 20 ng/g dw. Concentrations of total(Σ) DDTs(0.49–37 ng/g dw), HCHs(0.55–4.5 ng/g dw), and HCB(0.1–1.0 ng/g dw) were much higher than the other OCPs and accounted for 89% of the ΣOCP concentrations. p,p′-DDT was the dominant member of the DDT pesticide group and-HCH was the dominant HCH isomer. The p,p′-DDT/p,p′-DDE and-HCH/-HCH ratios suggested that there were recent DDT and-HCH releases. OCP concentrations in the air were estimated from the tree bark, and the estimated median ΣDDTs, ΣHCHs, and HCB concentrations in the air were 0.09, 0.14, and 0.024 pg/m3, respectively. The relationship between total OCP concentrations and socioeconomic and natural environment indices were assessed using multiple linear regression analysis, and a regression equation including all these factors was obtained. Population density and tertiary industry were the two dominant factors that appeared to affect OCP concentrations in the upper Yellow River region. | Chang He Jun Jin Bailin Xiang Ying Wang Zhaohui Ma | 2014 | Journal of Environmental Sciences2014，26，3： | 7 |
| 5 | Molecular phylogeny of coronaviruses including human SARS-CoV显示文摘Phylogenetic tree of coronaviruses (CoVs) in-cluding the human SARS-associated virus is reconstructed from complete genomes by using our newly developed K- string composition approach. The relation of the human SARS-CoV to other coronaviruses, i.e. the rooting of the tree is suggested by choosing an appropriate outgroup. SARS-CoV makes a separate group closer but still distant from G2 (CoVs in mammalian host). The relation between different isolates of the human SARS virus is inferred by first constructing an ultrametric distance matrix from counting sequence variations in the genomes. The resulting tree is consistent with clinic relations between the SARS-CoV isolates. In addition to a larger variety of coronavirus ge-nomes these results provide phylogenetic knowledge based on independent novel methodology as compared to recent phylogenetic studies on SARS-CoV. | GAO Lei QI Ji WEI Haibin SUN Yigang HAO Bailin | 2003 | Chinese Science Bulletin2003，48，12： | 7 |
| 6 | A draft sequence of the rice (Oryza sativa ssp. indica) genome显示文摘The sequence of the rice genome holds fundamental information for its biology, including physiology, genetics, development, and evolution, as well as information on many beneficial phenotypes of economic significance. Using a 'whole genome shotgun' approach, we have pro-duced a draft rice genome sequence of Oryza sativa ssp. in-dica, the major crop rice subspecies in China and many other regions of Asia. The draft genome sequence is constructed from over 4.3 million successful sequencing traces with an accumulative total length of 2214.9 Mb. The initial assembly of the non-redundant sequences reached 409.76 Mb in length, based on 3.30 million successful sequencing traces with a total length of 1797.4 Mb from an indica variant cultivar 93-11, giving an estimated coverage of 95.29% of the rice genome with an average base accuracy of higher than 99%. The coverage of the draft sequence, the randomness of the sequence distribution, and the consistency of BIG-ASSEM-BLER, a custom-designed software package | YU Jun, HU Songnian, WANG Jun,LI Songgang WONG Ka-Shu Gane, LIU Bin,DENG Yajun, DAI Li, ZHOU Yan,ZHANG Xiuqing, CAO Mengliang, LIU Jing,SUN Jiandong , TANG Jiabin, CHEN Yanjiong,HUANG Xiaobing, LIN Wei, YE Chen, TONG Wei,CONG Lijuan, GENG Jianing, HAN Yujun, LI Lin,LI Wei, HU Guangqiang, HUANG Xiangang,LI Wenjie, LI Jian, LIU Zhanwei, LI Long,LIU Jianping, Ql Qiuhui, LIU Jinsong, LI Li,WANG Xuegang, LU Hong, WU Tingling,ZHU Miao, Nl Peixiang, HAN Hua, DONG Wei,REN Xiaoyu, FENG Xiaoli, GUI Peng,LI Xianran, WANG Hao, XU Xin, ZHAI Wenxue,XU Zhao, ZHANG Jinsong, HE Sijie,ZHANG Jianguo, XU Jichen, ZHANG Kunlin,ZHENG Xianwu, DONG Jianhai, ZENG Wanyong,TAO Lin, CHEN Xuewei, HE Jun, LIU Daofeng,TIAN Wei, TIAN Chaoguang, XIA Hongai,LI Gang, GAO Hui, LI Ping, CHEN Wei ,WANG Xudong, ZHANG Yong, HU Jianfei,WANG Jing, LIU Song, YANG Jian,ZHANG Guangyu, XIONG Yuqing, LI Zhijie,MAO Long, ZHOU Chengshu, ZHU Zhen,CHEN Runsheng, HAO Bailin,ZHENG Weimou, CHEN Shouyi, QUO Wei,LI Guojie, LIU Siqi, HUANG Guyang,TAO Ming, WANG Jian, ZHU Lihuang,YUAN Longping& YANG HuanmingBeijing Genomics Institute/Center of Genomics & Bioinformatics, Chinese Academy of Sciences, Beijing 101300, China Hangzhou Genomics Institute/Institute of Bioinformatics of Zhejiang University/Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, China Institute of Genetics, Chinese Academy of Sciences, Beijing 100101, China National Hybrid Rice R & D Center, Changsha 410125, China Laboratory of Bioinformatics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China College of Life Sciences, Peking University, Beijing 100871, China Institute of Theoretical Physics, Chinese Academy of Sciences, Beijing 1Q0080, China Digital China Ltd., Beijing 100080, China Institute of Computing Technology, Chinese Academy of Sciences, Beijing 100080, China Medical College, Xi’an Jiaotong University, Xi’an 710061, ChinaThese authors contributed equally to this work.Corresponding author.Corresponden | 2001 | Chinese Science Bulletin2001，46，23： | 6 |
| 7 | The RppC-AvrRppC NLR-effector interaction mediates the resistance to southern corn rust in maize显示文摘Southern corn rust(SCR),caused by the fungal pathogen Puccinia polysora,is a major threat to maize pro-duction worldwide.Efficient breeding and deployment of resistant hybrids are key to achieving durable control of SCR.Here,we report the molecular cloning and characterization of RppC,which encodes an NLR-type immune receptor and is responsible for a major SCR resistance quantitative trait locus.Further-more,we identified the corresponding avirulence effector,AvrRppC,which is secreted by P.polysora and triggers RppC-mediated resistance.Allelic variation of AvrRppC directly determines the effectiveness of RppC-mediated resistance,indicating that monitoring of AvrRppC variants in the field can guide the rational deployment of RppC-containing hybrids in maize production.Currently,RppC is the most frequently deployed SCR resistance gene in China,and a better understanding of its mode of action is crit-ical for extending its durability. | Ce Deng April Leonard James Cahill Meng Lv Yurong Li Shawn Thatcher Xueying Li Xiaodi Zhao Wenjie Du Zheng Li Huimin Li Victor Llaca Kevin Fengler Lisa Marshall Charlotte Harris Girma Tabor Zhimin Li Zhiqiang Tian Qinghua Yang Yanhui Chen Jihua Tang Xintao Wang Junjie Hao Jianbing Yan Zhibing Lai Xiaohong Fei Weibin Song Jinsheng Lai Xuecai Zhang Guoping Shu Yibo Wang Yuxiao Chang Weiling Zhu Wei Xiong Juan Sun Bailin Li Junqiang Ding | 2022 | Molecular Plant2022，15，5： | 6 |
| 8 | Removing local irregularities of triangular meshes with highlight line models显示文摘The highlight line model is a powerful tool in assessing the quality of a surface. It increases the ffexibility of an interactive design environment. In this paper, a method to generate a highlight line model on an arbitrary triangular mesh is presented. Based on the highlight line model, a technique to remove local shape irregularities of a triangular mesh is then presented. The shape modification is done by solving a minimization problem and performing an iterative procedure. The new technique improves not only the shape quality of the mesh surface, but also the shape of the highlight line model. It provides an intuitive and yet suitable method for locally optimizing the shape of a triangular mesh. | YONG JunHai DENG BaiLin CHENG FuHua WANG Bin WU Kun GU HeJin | 2009 | Science in China(Series F)2009，52，3： | 5 |
| 9 | Sodium Citrate: A Universal Reducing Agent for Reduction/ Decoration of Graphene Oxide with Au Nanoparticles显示文摘一个灵巧的方法为减少的 graphene 氧化物 nanosheets (RGONS ) 的合成被建议,使用 graphene 氧化物并且 Au 减少 nanoparticle 的 graphene 氧化物 nanosheet (Au-RGONS ) 混血儿材料(去) 作为先锋和钠柠檬酸盐作为 reductant 和 stabilizer。产生 RGONS 和 Au-RGONS 混血儿材料被紫外力的光谱学描绘, X 光检查光电子光谱学, Fourier 变换红外线的光谱学,拉曼光谱学,原子力量显微镜学,传播电子显微镜学,和 X 光检查衍射。RGONS 和 Au-RGONS 混血儿材料通过在剩余之间的氢契约形成了稳定的胶体的分散,这被发现 RGONS 的表面和钠柠檬酸盐的 hydroxyl/carboxyl 组上的包含氧的功能。到三种 biomolecules 的 RGONS 和 Au-RGONS 混合的修改材料的玻璃质的碳电极(GCE ) 的电气化学的回答被调查,并且所有相对赤裸的 GCE 在电气化学的性能他们显示出显著增加。 | Zhe Zhang Huihui Chen Chunyan Xing Mingyi Guo Fugang Xu Xiaodan Wang Hermann J. Gruber Bailin Zhang Jilin Tang | 2011 | Nano Research2011，4，6： | 5 |
| 10 | Jackknife and Bootstrap Tests of the Composition Vector Trees显示文摘Composition vector trees (CVTrees) are inferred from whole-genome data by an alignment-free and parameter-free method. The agreement of these trees with the corresponding taxonomy provides an objective justification of the inferred phylogeny. In this work, we show the stability and self-consistency of CVTrees by performing bootstrap and jackknife re-sampling tests adapted to this alignment-free approach. Our ultimate goal is to advocate the viewpoint that time-consuming statistical re-sampling tests can be avoided at all in using this alignment-free approach. Agreement with taxonomy should be taken as a major criterion to estimate prokaryotic phylogenetic trees. | Guanghong Zuo1,2, Zhao Xu1,3, Hongjie Yu1,4, and Bailin Hao1,5,6 1T-Life Research Center & Department of Physics, Fudan University, Shanghai 200433, China 2Shanghai Institute of Applied Physics, Chinese Acadamy of Sciences, Shanghai 201800, China 3Applied Biosystems, Inc., Beijing 100027, China 4Fudan-VARI Center for Genetic Epidemiology, Fudan University, Shanghai 200433, China 5Institute of Theoretical Physics, Chinese Acadamy of Sciences, Beijing 100190, China 6Santa Fe Institute, Santa Fe, NM 87505, USA. | 2010 | Genomics, Proteomics & Bioinformatics2010，8，4： | 5 |
| 11 | Whole-genome based Archaea phylogeny and taxonomy: A composition vector approach显示文摘The newly proposed alignment-free and parameter-free composition vector (CVtree) method has been successfully applied to infer phylogenetic relationship of viruses, chloroplasts, bacteria, and fungi from their whole-genome data. In this study we pay special attention to the phylogenetic positions of 56 Archaea genomes among which 7 species have not been listed either in Bergey’s Manual of Systematic Bacteriology or in Taxonomic Outline of Bacteria and Archaea (TOBA). By inspecting the stable monophyletic branchings in CVTrees reconstructed from a total of 861 genomes (56 Archaea plus 797 Bacteria, using 8 Eukarya as outgroups) definite taxonomic assignments were proposed for these not-fully-classified species. Further development of Archaea taxonomy may verify the predicted phylogenetic results of the CVTree approach. | SUN JianDong XU Zhao HAO BaiLin | 2010 | Chinese Science Bulletin2010，55，22： | 5 |
| 12 | Shigella Strains Are Not Clones of Escherichia coli but Sister Species in the Genus Escherichia显示文摘Shigella species and Escherichia coli are closely related organisms. Early phenotyping experiments and several recent molecular studies put Shigella within the species E. coli. However, the whole-genome-based, alignment-free and parameter-free CVTree approach shows convincingly that four established Shigella species, Shigella boydii, Shigella sonnei, Shigella felxneri and Shigella dysenteriae, are distinct from E. coli strains, and form sister species to E. coli within the genus Escherichia. In view of the overall success and high resolution power of the CVTree approach, this result should be taken seriously. We hope that the present report may promote further in-depth study of the Shigella-E. coli relationship. | Guanghong Zuo Zhao Xu Bailin Hao | 2013 | Genomics, Proteomics & Bioinformatics2013，11，1： | 5 |
| 13 | Primary Screening of 10-Hydroxy-2-Decenoic Acid Productive Strains显示文摘In this paper, eleven strains, which were screened strictly from raw royal jelly, soil andhoneycomb etc. by meansof dilution plate and spread plate methods, were cultured at 28℃ for 60 h with shaking. To determine whether they could yield10-Hydroxy-2-decenoic acid during fermentation, gas chromatography and gas chromatography-mass spectrometry methodswere used. The results showed that the strains BH002 and BH004, were both identified as Crytococcaceae, where BH002was primarily classified into Candida for possessing the abilities. The 10-HDA productivity of Candida BH002 and that ofBH004 were 0.327% and 0.2648% respectively. | Bailin Li Yongxin Kang Lingjing Wei Lizhen HuangFaculty of Food Science & Technology Shanghai Fisheries University Shanghai 200090 | 2002 | 食品科学2002，23，8： | 4 |
| 14 | Metallogenic Age of Dapinggou Gold Deposit in Northern Altun Area, Northwestern China显示文摘Studying the metallogenic age of Dapinggou gold deposit may provide important material not only for the study of metallization and the further prospecting of gold deposits but also for research into tectonic evolution in the Altun area. In this study, we used Rb-Sr isotopic dating method of fluid inclusion in the Au-bearing quartz, combining field investigation, REE, sulfur isotopes, lead isotopes, strontium isotopes and hydrogen-oxygen isotope, to determine the metallogenic age of the Dapinggou gold deposit. The only newly-discovered medium-sized gold deposit in the northern Altun area, Dapinggou gold deposit, is controlled by a ductile shear zone. It is characterized by mainly altered mylonite-types with a little K-feldspar quartz vein-types. Data from REE, sulfur isotopes, lead isotopes and strontium isotopes show that the source materials of the deposit were derived mainly from the metamorphic rocks. The data from the inclusion and hydrogen-oxygen isotope indicate that the ore-forming fluid came mainly from dynamic metamorphic water and partly from remelting magmatic water, with a little influence from meteoric water. The density of the ore-forming fluid is 0.791-0.971 g/cm3 and it contains 2.36 %-5.5 % salinity. The gold deposit was formed at 1.61-2.68 km below the surface at a temperature of 198-290 ℃ and a pressure of (420-700)×105 Pa. The isotopic age from the Rb-Sr isochron of fluid inclusion in quartz is 487 Ma, which indicates that the mineralization occurred in the early Caledonian epoch. The study on the metallogenic age of Dapinggou gold deposit may provide important material not only for the study of metallization and the further prospecting of gold deposits but also for research into tectonic evolution in the Altun area. | Chen Bailin Wang Xiaofeng Yang Yi Chen Xuanhua | 2005 | Journal of China University of Geosciences2005，16，4： | 4 |
| 15 | VERTICAL HEREDITY VS. HORIZONTAL GENE TRANSFER: A CHALLENGE TO BACTERIAL CLASSIFICATION显示文摘The diversity and classification of microbes has been a long-standing issue.Molecular phylogeny of the prokaryotes based on comparison of the 16S rRNA sequences of the small ribosomal subunit has led to a reasonable tree of life in the late 1970s. How-ever, the availability of more and more complete bacterial genomes has brought about complications instead of refinement of the tree. In particular, it turns out that different choice of genes may tell different history. This might be caused by possible horizontal gene transfer (HGT) among species. There is an urgent need to develop phylogenetic methods that make use of whole genome data. We describe a new approach in molecular phylogeny,namely, tree construction based on K-tuple frequency analysis of the genomic sequences.Putting aside the technicalities, we emphasize the transition from randomness to determin-ism when the string length K increases and try to comment on the challenge mentioned in the title. | HAO Bailin(Institute of Theoretical Physics, Academy of Chinese Sciences, Beijing 100080, China Senior International Fellow of the Santa Fe Institute T-Life Research Center, Fudan University,Shanghai 200433, China)QI Ji(Institute of Theoretical Physics, Beijing 100080, China) | 2003 | Journal of Systems Science & Complexity2003，16，3： | 3 |
| 16 | LVTree Viewer:An Interactive Display for the All-Species Living Tree Incorporating Automatic Comparison with Prokaryotic Systematics显示文摘We describe an interactive viewer for the All-Species Living Tree(LVTree). The viewer incorporates treeing and lineage information from the ARB-SILVA website. It allows collapsing the tree branches at different taxonomic ranks and expanding the collapsed branches as well, keeping the overall topology of the tree unchanged. It also enables the user to observe the consequence of trial lineage modifications by re-collapsing the tree. The system reports taxon statistics at all ranks automatically after each collapsing and re-collapsing. These features greatly facilitate the comparison of the 16 S rRNA sequence phylogeny with prokaryotic taxonomy in a taxon by taxon manner.In view of the fact that the present prokaryotic systematics is largely based on 16 S rRNA sequence analysis, the current viewer may help reveal discrepancies between phylogeny and taxonomy. As an application, we show that in the latest release of LVTree, based on 11,939 rRNA sequences, as few as 24 lineage modifications are enough to bring all but two phyla(Proteobacteria and Firmicutes) to monophyletic clusters. | Guanghong Zuo Xiaoyang Zhi Zhao Xu Bailin Hao | 2016 | Genomics, Proteomics & Bioinformatics2016，14，2： | 3 |
| 17 | Learning Context-based Embeddings for Knowledge Graph Completion显示文摘Purpose:Due to the incompleteness nature of knowledge graphs(KGs),the task of predicting missing links between entities becomes important.Many previous approaches are static,this posed a notable problem that all meanings of a polysemous entity share one embedding vector.This study aims to propose a polysemous embedding approach,named KG embedding under relational contexts(ContE for short),for missing link prediction.Design/methodology/approach:ContE models and infers different relationship patterns by considering the context of the relationship,which is implicit in the local neighborhood of the relationship.The forward and backward impacts of the relationship in ContE are mapped to two different embedding vectors,which represent the contextual information of the relationship.Then,according to the position of the entity,the entity’s polysemous representation is obtained by adding its static embedding vector to the corresponding context vector of the relationship.Findings:ContE is a fully expressive,that is,given any ground truth over the triples,there are embedding assignments to entities and relations that can precisely separate the true triples from false ones.ContE is capable of modeling four connectivity patterns such as symmetry,antisymmetry,inversion and composition.Research limitations:ContE needs to do a grid search to find best parameters to get best performance in practice,which is a time-consuming task.Sometimes,it requires longer entity vectors to get better performance than some other models.Practical implications:ContE is a bilinear model,which is a quite simple model that could be applied to large-scale KGs.By considering contexts of relations,ContE can distinguish the exact meaning of an entity in different triples so that when performing compositional reasoning,it is capable to infer the connectivity patterns of relations and achieves good performance on link prediction tasks.Originality/value:ContE considers the contexts of entities in terms of their positions in triples and the relationships they link to.It decomposes a relation vector into two vectors,namely,forward impact vector and backward impact vector in order to capture the relational contexts.ContE has the same low computational complexity as TransE.Therefore,it provides a new approach for contextualized knowledge graph embedding. | Fei Pu Zhongwei Zhang Yan Feng Bailin Yang | 2022 | Journal of Data and Information Science2022，7，2： | 3 |
| 18 | Numerical Modeling of Deformation at the Baiyun Gold Deposit,Northeastern China:Insights into the Structural Controls on Mineralization显示文摘The Qingchengzi ore field is an important gold-polymetallic center of the North China Cra-ton.It has been recognized that the gold deposits in Qingchengzi were controlled by structures like litho-logical interfaces and fractures along mechanically weak bedding and foliation planes,but it still remains poorly understood how the structures affected the localization of the gold deposits.Finite element based numerical modeling was used to reproduce the deformation process of the Baiyun gold deposit during the mineralization period.Paleoproterozoic schist and marble are widely exposed in Qingchengzi,and a large part of the Baiyun gold ores occurs along the interfaces between the schist and the marble.The modeling results suggest that the mechanical contrast between the schist and the marble may be a major reason why the stress was localized along their lithological interfaces under a compressional stress regime.Two parts of their lithological interfaces were identified to be easily stress-localized and first fractured:the interface between the schist and its underlying marble at shallower levels and the one between the schist and its overlying marble at deeper levels.Stress concentration in these two parts is independent on the dipping angle and direction of the interfaces.Therefore,mineralizing fluids may have been concentrated into these two parts.The first one is consistent with the present ore bodies of the Baiyun gold deposit,and the second one could be considered for deep prospecting.These findings also provide implications for the structural controls of lithological interfaces on the mineralization in other gold deposits of this region. | Xiangchong Liu Changhao Xiao Shuanhong Zhang Bailin Chen | 2021 | Journal of Earth Science2021，32，1： | 3 |
| 19 | CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy显示文摘A faithful phylogeny and an objective taxonomy for prokaryotes should agree with each other and ultimately follow the genome data. With the number of sequenced genomes reaching tens of thousands, both tree inference and detailed comparison with taxonomy are great challenges. We now provide one solution in the latest Release 3.0 of the alignment-free and whole-genome-based web server CVTree3. The server resides in a cluster of 64 cores and is equipped with an interactive,collapsible, and expandable tree display. It is capable of comparing the tree branching order with prokaryotic classification at all taxonomic ranks from domains down to species and strains.CVTree3 allows for inquiry by taxon names and trial on lineage modifications. In addition, it reports a summary of monophyletic and non-monophyletic taxa at all ranks as well as produces print-quality subtree figures. After giving an overview of retrospective verification of the CVTree approach, the power of the new server is described for the mega-classification of prokaryotes and determination of taxonomic placement of some newly-sequenced genomes. A few discrepancies between CVTree and 16 S r RNA analyses are also summarized with regard to possible taxonomic revisions. CVTree3 is freely accessible to all users at http://gffzzdfb85a54d90f4613hb65v9k9woxqp6cf9.ffgz.tsg.suse.edu.cn/cvtree3/ without login requirements. | Guanghong Zuo Bailin Hao | 2015 | Genomics, Proteomics & Bioinformatics2015，13，5： | 3 |
| 20 | Primary Studies on the Microbial Fermentation of 10-Hydroxy-2-Decenoic Acid By Candida BH002显示文摘Fermentation technology of Candida BH002, a 10-hydroxy-2-decenoic acid producing microorganism, was primarilystudied in this paper. Results showed that the optimum medium for the batch-fed fermentation was: sucrose 4%, ammoniumsulfate 0.3%, peptone 0.1%, beef extract 0.1%, dipotassium hydrogen phosphate 0.2%, royal jelly 0.5%, magnesium sulfate0.05%, ferrous sulfate 0.001% and CoCl2 0.001% and pH 7.0. The optimum initial pH value, dissoluble oxygen and reducingsugar concentration were 7.0, 25ml/250ml and 7.0% respectively. Meanwhile, the effects of carbon source and metal ions onthe 10-hydroxy-2-decenoic acid biosynthesis were also studied primarily. | Yongxin Kang Bailin Li Guodong FanSchool of Food Science and Technology Shanghai Fisheries University Shanghai 200090 | 2002 | 食品科学2002，23，8： | 2 |
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