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| 1 | MIWI and piRNA-mediated cleavage of messenger RNAs in mouse testes显示文摘piRNA 机械在调停以它的角色著名 transposons 的 epigenetic silencing。最近的研究建议这功能也包含导出 transposon 的抄本的指导 piRNA 的劈开。同样多 piRNAs 也看起来有能力指向多样的 mRNAs,这提起 piRNAs 可以与 siRNAs 比广泛地扮演降级的吸引人的可能性特定的 mRNAs。直接测试这个假设,我们比较了联系的老鼠 PIWI (MIWI ) 有从老鼠睾丸的试验性地识别的劈开的 mRNA 碎片的 piRNAs,和主要发生在的观察劈开地点从 5 ′ 放 10;通常认为的指向结束 piRNAs。我们也注意了强壮的偏爱因为分别地,在核苷酸的 U 和 A 残余在 piRNAs 和 mRNA 碎片放 1 和 10,由“乒乓球”类似于 piRNA 扩大的模式的特征骑车。通过由介绍的 CLIP-seq 和基因表示 MIWI-RNA 相互作用印射,我们发现许多潜在的指向 piRNA 的 mRNAs 直接与 MIWI 交往,表演在 Miwi 的睾丸提高了表达式层次催化变异的鼠标。基于记者的试金进一步揭示了在调停 piRNA 的目标压抑的为 slicer 活动和 MIWI 的装载 piRNA 能力的在 piRNAs 和 mRNA 目标和要求之间的基础配对的重要性。重要地,我们证明某些关键 piRNA 目标的那合适的周转为精子形成是必要的。一起,这些调查结果为男细菌房间开发和成熟在鼠标睾丸和它的中央要求揭示 piRNA 机械的象 siRNA 一样函数。 | Peng Zhang Jun-Yan Kang Lan-Tao GOU Jiajia Wang Yuanchao Xue Geir Skogerboe Peng Dai Da-Wei Huang Runsheng Chen Xiang-Dong Fu Mo-Fang Liu Shunmin He | 2015 | Cell Research2015，25，2： | 35 |
| 2 | A Global Identification and Analysis of Small Nucleolar RNAs and Possible Intermediate-Sized Non-Coding RNAs in Oryza sativa显示文摘积累的证据建议非编码的 RNA (ncRNAs ) 在许多真核细胞的有机体普遍、机能上地重要。在这研究,我们采用了分别和 cDNA 图书馆构造方法列在后面由的一种特殊尺寸 454 系统地介绍米饭的深定序中间尺寸的 ncRNAs。我们的分析总共导致了 1349 ncRNAs 的鉴定,包括一个未知功能的范畴的 754 新奇 ncRNAs。所有识别 ncRNAs 的染色体分发没显示出海滨偏爱,并且显示了类似于与很少染色体相关性在编码蛋白质的基因观察了那的一个模式。非常, ncRNAs 的一半被集中在附近编码区域的 5 和 3 个终点正海滨。新奇 ncRNAs 的多数是米饭特定,当 78% 小核仁的 RNA (snoRNAs ) 被保存时。双人脚踏车复制驾驶了扩大在 snoRNA 基因家庭的一半上。而且, 90% snoRNA 候选人被显示特别地生产在 2030 nt,其 80% 通常与淘金者蛋白质被联系,和 AGO1b 之间的小 RNA。总的来说,我们的调查结果在 monocot 种提供中间尺寸的非编码的 transcriptome 的一个全面看法,它将为 ncRNA 函数的深入的分析用作一个有用平台。 | Ting-Ting Liu Danmeng Zhu Wei Chen Wei Deng Hang He Guangming He Baoyan Bai Yijun Qi Runsheng Chen Xing Wang Deng | 2013 | Molecular Plant2013，6，3： | 10 |
| 3 | Applications of Electrical Capacitance Tomography in Two Phase Flow Visualization显示文摘The successful application of Electrical Capacitance Tomography (ECT) depends heavily on the image reconstruction speed and quality. The two requirements usually cannot be satisfied simultaneously. Also, for a large number of acquired 2D ECT images, a 3D presentation of them is much desired to track the variations of the material distribution in a third dimension. To facilitate ECT for practical flow analyses in process engineering, the authors have recently developed algorithms for 3D image presentation and for online iterative image reconstruction that only takes the same time as a linear back projection method but yields good image qualities as the Landweber iterative method does. The new methods have been successfully applied to visualize several classes of two phase flows, namely fluidization, cyclone separation, circulating rate determination in circulating fluidized beds, pneumatic conveying, rotating drum mixing. Special characteristics in each case have been discussed and valuable results are obtained, which are reported in this paper. | Shi Liu Runsheng Yan Haigang Wang Fan Jiang Xiangyun Dong | 2004 | Journal of Thermal Science2004，13，2： | 9 |
| 4 | Genomic Features and Regulatory Roles of Intermediate-Sized Non-Coding RNAs in Arabidopsis显示文摘在染色体宽的技术的最近的进展与各种各样的尺寸 ineukaryotes 允许几千非编码的 RNA 的鉴定,其中一些进一步被显示了在许多生物进程服务重要函数。然而在 modelplant Arabidopsis,新奇中介大小的 ncRNAs (im-ncRNAs )(50 ~ 300 nt ) 很限制了信息。由与深定序的技术使用修改隔离 strategycombined,我们全球性在 Arabidopsis 识别了 838 im-ncRNAs。多于一半(58%) 是新 ncRNA 种类,主要进化分叉。有趣地,与 5-UTR-derived 小说 im-ncRNAs 注解了 protein-codinggenes 趋于高度被表示。为 intergenic im-ncRNAs,他们比得上在幼苗的 mRNAs 的平均 abundanceswere,而是子集,在开始衰老的展出显著地更低的表示离开。进一步, intergenic im-ncRNAs 被调整由类似基因并且编码蛋白质的基因的到那些的 epigenetic 机制,和 someshowed 发展地调整了表示模式。基因屏蔽显示出的大规模颠倒 down-regulationof 很多 im-ncRNAs 在 vivo 导致了明显的分子的变化或反常发展显型,在植物生长和开发显示 im-ncRNAs 的功能的重要性。一起,我们的结果证明 thatnovel Arabidopsis im-ncRNAs 发展地被调整,功能的部件在 transcriptome.Key 词发现了: | Yuqiu Wang Xuncheng Wang Wei Deng Xiuduo Fan Ting-Ting Liu Guangming He Runsheng Chen William Terzaghi Danmeng Zhu Xing Wang Deng | 2014 | Molecular Plant2014，7，3： | 9 |
| 5 | Integrated transcriptomic and metabolomic analyses of a wax deficient citrus mutant exhibiting jasmonic acid-mediated defense against fungal pathogens显示文摘Naturally,resistant crop germplasms are important resources for managing the issues of agricultural product safety and environment deterioration.We found a spontaneous mutant of‘Newhall’navel orange(Citrus sinensis Osbeck)(MT)with broad-spectrum protections against fungal pathogens in the orchard,postharvest-storage,and artificial inoculation conditions.To understand the defense mechanism of MT fruit,we constructed a genome-scale metabolic network that integrated metabolome and transcriptome datasets.The coordinated transcriptomic and metabolic data were enriched in two sub-networks,showing the decrease in very long chain fatty acid(by 41.53%)and cuticular wax synthesis(by 81.34%),and increase in the synthesis of jasmonic acid(JA)(by 95.23%)and JA-induced metabolites such as 5-dimethylnobietin(by 28.37%)in MT.Furthermore,cytological and biochemical analyses confirmed that the response to fungal infection in MT was independent of wax deficiency and was correlated with the levels of jasmonates,and the expression of plant defensin gene PDF1.2.Results of exogenous application of MeJA and JA inhibitors such as propyl gallate proved that JA-mediated defense contributes to the strong tolerance against pathogens in MT.Our results indicated that jasmonate biosynthesis and signaling are stimulated by the fatty acid redirection of MT,and participate in the tolerance of pathogenic fungi. | Yizhong He Jingwen Han Runsheng Liu Yuduan Ding Jinqiu Wang Li Sun Xiaoming Yang Yunliu Zeng Weiwei Wen Juan Xu Hongming Zhang Xiang Yan Zhaoxing Chen Zuliang Gu Hong Chen Huanqing Tang Xiuxin Deng Yunjiang Cheng | 2018 | Horticulture Research2018，5，1： | 8 |
| 6 | Powertrain design and energy management of a novel coaxial series-parallel plug-in hybrid electric vehicle显示文摘For a series plug-in hybrid electric vehicle,higher working efficiency can be achieved by the drive system with two small motors in parallel than that with one big motor alone.However,the overly complex structure will inevitably lead to a substantial increase in the development cost.To improve the system price-performance ratio,a new kind of series-parallel hybrid system evolved from the series plug-in hybrid system is designed.According to the technical parameters of the selected components,the system model is established,and the vehicle dynamic property and pure electric drive economy are evaluated.Based on the dynamic programming,the energy management strategy for the drive system under the city driving cycle is developed,and the superiority validation of the system is completed.For the studied vehicle driven by the designed series-parallel plug-in hybrid system,compared with the one driven by the described series plug-in hybrid system,the dynamic property is significantly improved because of the multi-power coupling,and the fuel consumption is reduced by 11.4%with 10 city driving cycles.In a word,with the flexible configuration of the designed hybrid system and the optimized control strategy of the energy management,the vehicle performance can be obviously improved. | ZHANG LiPeng QI BingNan ZHANG RunSheng LIU JingChao WANG LiQiang | 2016 | Science China(Technological Sciences)2016，59，4： | 7 |
| 7 | A draft sequence of the rice (Oryza sativa ssp. indica) genome显示文摘The sequence of the rice genome holds fundamental information for its biology, including physiology, genetics, development, and evolution, as well as information on many beneficial phenotypes of economic significance. Using a 'whole genome shotgun' approach, we have pro-duced a draft rice genome sequence of Oryza sativa ssp. in-dica, the major crop rice subspecies in China and many other regions of Asia. The draft genome sequence is constructed from over 4.3 million successful sequencing traces with an accumulative total length of 2214.9 Mb. The initial assembly of the non-redundant sequences reached 409.76 Mb in length, based on 3.30 million successful sequencing traces with a total length of 1797.4 Mb from an indica variant cultivar 93-11, giving an estimated coverage of 95.29% of the rice genome with an average base accuracy of higher than 99%. The coverage of the draft sequence, the randomness of the sequence distribution, and the consistency of BIG-ASSEM-BLER, a custom-designed software package | YU Jun, HU Songnian, WANG Jun,LI Songgang WONG Ka-Shu Gane, LIU Bin,DENG Yajun, DAI Li, ZHOU Yan,ZHANG Xiuqing, CAO Mengliang, LIU Jing,SUN Jiandong , TANG Jiabin, CHEN Yanjiong,HUANG Xiaobing, LIN Wei, YE Chen, TONG Wei,CONG Lijuan, GENG Jianing, HAN Yujun, LI Lin,LI Wei, HU Guangqiang, HUANG Xiangang,LI Wenjie, LI Jian, LIU Zhanwei, LI Long,LIU Jianping, Ql Qiuhui, LIU Jinsong, LI Li,WANG Xuegang, LU Hong, WU Tingling,ZHU Miao, Nl Peixiang, HAN Hua, DONG Wei,REN Xiaoyu, FENG Xiaoli, GUI Peng,LI Xianran, WANG Hao, XU Xin, ZHAI Wenxue,XU Zhao, ZHANG Jinsong, HE Sijie,ZHANG Jianguo, XU Jichen, ZHANG Kunlin,ZHENG Xianwu, DONG Jianhai, ZENG Wanyong,TAO Lin, CHEN Xuewei, HE Jun, LIU Daofeng,TIAN Wei, TIAN Chaoguang, XIA Hongai,LI Gang, GAO Hui, LI Ping, CHEN Wei ,WANG Xudong, ZHANG Yong, HU Jianfei,WANG Jing, LIU Song, YANG Jian,ZHANG Guangyu, XIONG Yuqing, LI Zhijie,MAO Long, ZHOU Chengshu, ZHU Zhen,CHEN Runsheng, HAO Bailin,ZHENG Weimou, CHEN Shouyi, QUO Wei,LI Guojie, LIU Siqi, HUANG Guyang,TAO Ming, WANG Jian, ZHU Lihuang,YUAN Longping& YANG HuanmingBeijing Genomics Institute/Center of Genomics & Bioinformatics, Chinese Academy of Sciences, Beijing 101300, China Hangzhou Genomics Institute/Institute of Bioinformatics of Zhejiang University/Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, China Institute of Genetics, Chinese Academy of Sciences, Beijing 100101, China National Hybrid Rice R & D Center, Changsha 410125, China Laboratory of Bioinformatics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China College of Life Sciences, Peking University, Beijing 100871, China Institute of Theoretical Physics, Chinese Academy of Sciences, Beijing 1Q0080, China Digital China Ltd., Beijing 100080, China Institute of Computing Technology, Chinese Academy of Sciences, Beijing 100080, China Medical College, Xi’an Jiaotong University, Xi’an 710061, ChinaThese authors contributed equally to this work.Corresponding author.Corresponden | 2001 | Chinese Science Bulletin2001，46，23： | 6 |
| 8 | Review on biomass metallurgy:Pretreatment technology,metallurgical mechanism and process design显示文摘The metallurgy industry consumes a considerable amount of coal and fossil fuels,and its carbon dioxide emissions are increasing every year.Replacing coal with renewable,carbon-neutral biomass for metallurgical production is of great significance in reducing global carbon consumption.This study describes the current state of research in biomass metallurgy in recent years and analyzes the concept and scientific principles of biomass metallurgy.The fundamentals of biomass pretreatment technology and biomass metallurgy technology were discussed,and the industrial application framework of biomass metallurgy was proposed.Furthermore,the economic and social advantages of biomass metallurgy were analyzed to serve as a reference for the advancement of fundamental theory and industrial application of biomass metallurgy. | Jianliang Zhang Hongyuan Fu Yanxiang Liu Han Dang Lian Ye Alberto N.Conejio Runsheng Xu | 2022 | International Journal of Minerals,Metallurgy and Materials2022，29，6： | 4 |
| 9 | TDP-43 regulates cancer-associated microRNAs显示文摘 | Xiaowei Chen Zhen Fan Warren McGee Mengmeng Chen Ruirui Kong Pushuai Wen Tengfei Xiao Xiaomin Chen Jianghong Liu Li Zhu Runsheng Chen Jane Y. Wu | 2018 | Protein & Cell2018，9，10： | 4 |
| 10 | An Automatic Pronunciation Quality Assessing Algorithm for Computer Assisted Language Learning显示文摘 | LIANG Weiqian LIU Jia LIU Runsheng | 2005 | Chinese Journal of Electronics2005，14，4： | 3 |
| 11 | Identification of selenocyst-eine insertion sequence(SECIS) element in eukaryotic selenoproteins by RNA Draw program显示文摘The computer program RNA Draw was used to identify the secondary structures in the 3’untranslated regions (3’UTRs) of the mRNAs from 46 eukaryotic seleno-proteins among 7 species. The program found one or two possible SECIS elements in these selenoproteins. The SECIS element consists of a stem-loop or hairpin structure with three conserved sequences of AUGA-(A)AA-GA. SECIS element was not found by the RNA Draw program in randomly selected non-selenoproteins. The results showed that SECIS element is the unique character of the genes ofeukaryotic selenoproteins. Thus it is possible to use RNA Draw to search the SECIS elements in gene bank for potential new selenoproteins. | XU Huibi HUANG Kaixun QU Xianghu GAO Zhonghong LIU Qiong CHEN Runsheng XUAN Zhenyu | 2001 | Chinese Science Bulletin2001，46，14： | 2 |
| 12 | CircuitNet:an open-source dataset for machine learning applications in electronic design automation(EDA)显示文摘The electronic design automation(EDA)community has been actively exploring machine learning(ML)for very large-scale integrated computer-aided design(VLSI CAD).Many studies explored learning-based techniques for cross-stage prediction tasks in the design flow to achieve faster design convergence.Although building ML models usually requires a large amount of data. | Zhuomin CHAI Yuxiang ZHAO Yibo LIN Wei LIU Runsheng WANG Ru HUANG | 2022 | Science China(Information Sciences)2022，65，12： | 2 |
| 13 | DISTRIBUTED MONITORING SYSTEM RELIABILITY ESTIMATION WITH CONSIDERATION OF STATISTICAL UNCERTAINTY显示文摘Taking into account the whole system structure and the component reliability estimation uncertainty, a system reliability estimation method based on probability and statistical theory for distributed monitoring systems is presented. The variance and confidence intervals of the system reliability estimation are obtained by expressing system reliability as a linear sum of products of higher order moments of component reliability estimates when the number of component or system survivals obeys binomial distribution. The eigenfunction of binomial distribution is used to determine the moments of component reliability estimates, and a symbolic matrix which can facilitate the search of explicit system reliability estimates is proposed. Furthermore, a case of application is used to illustrate the procedure, and with the help of this example, various issues such as the applicability of this estimation model, and measures to improve system reliability of monitoring systems are discussed. | Yi Pengxing Yang Shuzi Du Runsheng Wu Bo Liu Shiyuan | 2005 | Chinese Journal of Mechanical Engineering2005，18，4： | 2 |
| 14 | On the extractionand separation of iodide complex of cadmium(II)in propyl-alcohol am-monium sulfate aqueous biphasic system显示文摘 | LIU Xiaohai GAO Yuntao TANG Runsheng | 2006 | Separation and PurificationTechnology2006，50，2： | 1 |
| 15 | On the extraction and separation of iodide complex of cadmium(II) in propyl-alcohol ammonium sulfate aqueous biphasic system显示文摘 | Xiaohai Liu Yuntao Gao Runsheng Tang Wei Wang | 2005 | Separation and Purification Technology2005，，2： | 1 |
| 16 | Study of purification of phenanthrene from phenanthrene waste 显示文摘 | Yao Runsheng Liu Zuyu Wang Zhizhong | 2010 | Indian Joumal of Sci- ence and Technology2010，3，12： | 1 |
| 17 | REE Geochemistry of Altered Fault Teetonites of Huize Type Zn - Pb -( Ge - Ag) Deposit, Yunnan Province, China 显示文摘 | Han Runsheng Liu Congqiang Emmanuel John M Carran- za | 2012 | Geochemistry : Exploration Environment Analysis2012，12，： | 1 |
| 18 | On the extraction and separation of iodide complex of cadmium(Ⅱ) in propylalcohol ammonium sulfate aqueous biphasic system显示文摘 | Liu Xiaohai Gao Yuntao Tang Runsheng | 2006 | Sep Puri Tech2006，50，2： | 1 |
| 19 | Optical performance of vertical single-axis tracked solar panels显示文摘 | Li Zhimin Liu Xinyue Tang Runsheng | 2011 | Renewable Energy2011，36，： | 1 |
| 20 | Copper(Ⅱ)-catalyzed synthesis of N-substituted-3-amino-4-cyanoisoquinoline-1(2H)-ones by the reaction of N-substituted-2-iodobenzamides with malononitrile显示文摘 | LIU Yeye ZENG Runsheng PAN Jie | 2014 | Chin J Chem2014，32，9： | 1 |
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