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| 1 | Integrated transcriptomic and metabolomic analyses of a wax deficient citrus mutant exhibiting jasmonic acid-mediated defense against fungal pathogens显示文摘Naturally,resistant crop germplasms are important resources for managing the issues of agricultural product safety and environment deterioration.We found a spontaneous mutant of‘Newhall’navel orange(Citrus sinensis Osbeck)(MT)with broad-spectrum protections against fungal pathogens in the orchard,postharvest-storage,and artificial inoculation conditions.To understand the defense mechanism of MT fruit,we constructed a genome-scale metabolic network that integrated metabolome and transcriptome datasets.The coordinated transcriptomic and metabolic data were enriched in two sub-networks,showing the decrease in very long chain fatty acid(by 41.53%)and cuticular wax synthesis(by 81.34%),and increase in the synthesis of jasmonic acid(JA)(by 95.23%)and JA-induced metabolites such as 5-dimethylnobietin(by 28.37%)in MT.Furthermore,cytological and biochemical analyses confirmed that the response to fungal infection in MT was independent of wax deficiency and was correlated with the levels of jasmonates,and the expression of plant defensin gene PDF1.2.Results of exogenous application of MeJA and JA inhibitors such as propyl gallate proved that JA-mediated defense contributes to the strong tolerance against pathogens in MT.Our results indicated that jasmonate biosynthesis and signaling are stimulated by the fatty acid redirection of MT,and participate in the tolerance of pathogenic fungi. | Yizhong He Jingwen Han Runsheng Liu Yuduan Ding Jinqiu Wang Li Sun Xiaoming Yang Yunliu Zeng Weiwei Wen Juan Xu Hongming Zhang Xiang Yan Zhaoxing Chen Zuliang Gu Hong Chen Huanqing Tang Xiuxin Deng Yunjiang Cheng | 2018 | Horticulture Research2018，5，1： | 8 |
| 2 | A draft sequence of the rice (Oryza sativa ssp. indica) genome显示文摘The sequence of the rice genome holds fundamental information for its biology, including physiology, genetics, development, and evolution, as well as information on many beneficial phenotypes of economic significance. Using a 'whole genome shotgun' approach, we have pro-duced a draft rice genome sequence of Oryza sativa ssp. in-dica, the major crop rice subspecies in China and many other regions of Asia. The draft genome sequence is constructed from over 4.3 million successful sequencing traces with an accumulative total length of 2214.9 Mb. The initial assembly of the non-redundant sequences reached 409.76 Mb in length, based on 3.30 million successful sequencing traces with a total length of 1797.4 Mb from an indica variant cultivar 93-11, giving an estimated coverage of 95.29% of the rice genome with an average base accuracy of higher than 99%. The coverage of the draft sequence, the randomness of the sequence distribution, and the consistency of BIG-ASSEM-BLER, a custom-designed software package | YU Jun, HU Songnian, WANG Jun,LI Songgang WONG Ka-Shu Gane, LIU Bin,DENG Yajun, DAI Li, ZHOU Yan,ZHANG Xiuqing, CAO Mengliang, LIU Jing,SUN Jiandong , TANG Jiabin, CHEN Yanjiong,HUANG Xiaobing, LIN Wei, YE Chen, TONG Wei,CONG Lijuan, GENG Jianing, HAN Yujun, LI Lin,LI Wei, HU Guangqiang, HUANG Xiangang,LI Wenjie, LI Jian, LIU Zhanwei, LI Long,LIU Jianping, Ql Qiuhui, LIU Jinsong, LI Li,WANG Xuegang, LU Hong, WU Tingling,ZHU Miao, Nl Peixiang, HAN Hua, DONG Wei,REN Xiaoyu, FENG Xiaoli, GUI Peng,LI Xianran, WANG Hao, XU Xin, ZHAI Wenxue,XU Zhao, ZHANG Jinsong, HE Sijie,ZHANG Jianguo, XU Jichen, ZHANG Kunlin,ZHENG Xianwu, DONG Jianhai, ZENG Wanyong,TAO Lin, CHEN Xuewei, HE Jun, LIU Daofeng,TIAN Wei, TIAN Chaoguang, XIA Hongai,LI Gang, GAO Hui, LI Ping, CHEN Wei ,WANG Xudong, ZHANG Yong, HU Jianfei,WANG Jing, LIU Song, YANG Jian,ZHANG Guangyu, XIONG Yuqing, LI Zhijie,MAO Long, ZHOU Chengshu, ZHU Zhen,CHEN Runsheng, HAO Bailin,ZHENG Weimou, CHEN Shouyi, QUO Wei,LI Guojie, LIU Siqi, HUANG Guyang,TAO Ming, WANG Jian, ZHU Lihuang,YUAN Longping& YANG HuanmingBeijing Genomics Institute/Center of Genomics & Bioinformatics, Chinese Academy of Sciences, Beijing 101300, China Hangzhou Genomics Institute/Institute of Bioinformatics of Zhejiang University/Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, China Institute of Genetics, Chinese Academy of Sciences, Beijing 100101, China National Hybrid Rice R & D Center, Changsha 410125, China Laboratory of Bioinformatics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China College of Life Sciences, Peking University, Beijing 100871, China Institute of Theoretical Physics, Chinese Academy of Sciences, Beijing 1Q0080, China Digital China Ltd., Beijing 100080, China Institute of Computing Technology, Chinese Academy of Sciences, Beijing 100080, China Medical College, Xi’an Jiaotong University, Xi’an 710061, ChinaThese authors contributed equally to this work.Corresponding author.Corresponden | 2001 | Chinese Science Bulletin2001，46，23： | 6 |
| 3 | On the extractionand separation of iodide complex of cadmium(II)in propyl-alcohol am-monium sulfate aqueous biphasic system显示文摘 | LIU Xiaohai GAO Yuntao TANG Runsheng | 2006 | Separation and PurificationTechnology2006，50，2： | 1 |
| 4 | Experimental investigation on solar drying of salted greengages显示文摘 | Li Zhimin Zhong Hao Tang Runsheng | 2006 | Renewable Energy2006，31，6： | 1 |
| 5 | Assessment of uncertainty in mean heat loss coefficient of all glass evacuated solar collector tube testing显示文摘 | Tang Runsheng Li Zhimin Zhong Hao etal | 2006 | Energy Conversion & Management2006，47，： | 1 |
| 6 | Towards green rural energy in Yunnan,China显示文摘 | ZHIMIN LI RUNSHENG TANG CHAOFENG XIA | 2005 | Renewable Energy2005，30，： | 1 |
| 7 | On the extraction and separation of iodide complex of cadmium(II) in propyl-alcohol ammonium sulfate aqueous biphasic system显示文摘 | Xiaohai Liu Yuntao Gao Runsheng Tang Wei Wang | 2005 | Separation and Purification Technology2005，，2： | 1 |
| 8 | Optical perform- ance of inclined south-north single-axis tracked solar pan-els显示文摘 | Li Zhimin LiuXinyue Tang Runsheng | 2010 | Energy2010，35，6： | 1 |
| 9 | Optimal tilt-angles for solar collectors used in China 显示文摘 | Tang Runsheng Wu Tong | 2004 | Applied Energy2004，79，3： | 1 |
| 10 | On the extraction and separation of iodide complex of cadmium(Ⅱ) in propylalcohol ammonium sulfate aqueous biphasic system显示文摘 | Liu Xiaohai Gao Yuntao Tang Runsheng | 2006 | Sep Puri Tech2006，50，2： | 1 |
| 11 | Optical performance of vertical single-axis tracked solar panels显示文摘 | Li Zhimin Liu Xinyue Tang Runsheng | 2011 | Renewable Energy2011，36，： | 1 |
| 12 | Feasibility and optical performance of one axis three positions sun-tracking polar-axis aligned CPCs for photovohaic applications 显示文摘 | Tang Runsheng Yu Yamei | 2010 | Solar Energy2010，84，9： | 1 |
| 13 | Experimental investigation on solar drying of salted greengages显示文摘 | Li Zhimin Zhong Hao Tang Runsheng | 2006 | Renewable Energy2006，31，6： | 1 |
| 14 | On the extraction and separation of iodide complex of cadmium (II) in propyl-alcohol ammonium sulfate aqueous biphasic system显示文摘 | Xiaohai Liu Yuntao Gao Runsheng Tang et at | 2006 | Separation and Purification Technology2006，50，2： | 1 |
| 15 | Development and validation of a quality of life instrument for patients with drug dependence: Comparisons with SF-36 and WHOQOL-100显示文摘 | Chonghua Wan Jiqian Fang Runsheng Jiang Jie Shen Dan Jiang Xin Tu Susan Messing Wan Tang | 2011 | International Journal of Nursing Studies2011，，9： | 1 |
| 16 | On the extraction and separation of iodide complex of cadmium (II) in propyl-alcohol ammonium sulfate aqueous bipha- sic system 显示文摘 | Liu Xiaohai Gao Yuntao Tang Runsheng | 2006 | Separation and Purification Technology2006，50，2： | 1 |
| 17 | Assessment of uncertainty in mean heat loss coefficient of all glass evacuated solar collector tube testing 显示文摘 | Tang Runsheng Li Zhimin Zhong Hao | 2006 | Energy Conversion & Management2006，47，： | 1 |
| 18 | Optical performance of vertical single-axis tracked solar panels显示文摘 | Li Zhimin Liu Xinyue Tang Runsheng | 2011 | Renewable Energy2011，36，1： | 1 |
| 19 | Experimental investigation on solar drying of salted greengages 显示文摘 | Li Zhimin Zhong Hao Tang Runsheng | 2006 | Renewable Energy2006，31，6： | 1 |
| 20 | Comparative studies on thermal performance of water-in- glass evacuated tube solar water heaters with different collector tilt-angles 显示文摘 | Tang Runsheng Yang Yuqin Gao Wenfeng | 2011 | Solar Energy2011，85，7： | 1 |
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