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| 1 | The contribution of distant hybridization with decaploid Agropyron elongatum to wheat improvement in China显示文摘Wheat is a staple food crop in the world as well as in China. Because of the progress of wheat breeding and other agricultural sci-technologies, the wheat grain yield per unit area has increased more than five folds from 1952 to 2006 in China. The first part of this article briefly reviews the history of wheat breeding in China. Second, the establishment of 'Triticum aestivum-Agropyron' distant hybridization system and its contribution to wheat production and breeding in China are summarized. Finally, the future challenges of wheat breeding are discussed, which include how to increase the utilization efficiencies of water, soil nutrient and light energy through breeding. As an example, our research progress on how to increase light use efficiency in wheat through breeding is introduced and discussed. | Zhensheng Li Bin Li Yiping Tong | 2008 | Journal of Genetics and Genomics2008，35，8： | 26 |
| 2 | Genetic analysis of tolerance to photo-oxidative stress induced by high light in winter wheat (Triticum aestivum L.)显示文摘High light induced photooxidation (HLIP) usually leads to leaf premature senescence and causes great yield loss in winter wheat. In order to explore the genetic control of wheat tolerance to HLIP stress, a quantitative trait loci (QTL) analysis was conducted on a set of doubled haploid population, derived from two winter wheat cultivars. Actual values of chlorophyll content (Chl), minimum fluorescence level (Fo), maximum fluorescence level (Fm), and the maximum quantum efficiency of photosystem II (Fv/Fm) under both HLIP and non-stress conditions as well as the ratios of HLIP to non-stress were evaluated. HLIP considerably reduced Chl, Fm, and Fv/Fm, but in-creased Fo, compared with that under non-stress condition. A total of 27, 16, and 28 QTLs were associated with the investigated traits under HLIP and non-stress and the ratios of HLIP to non-stress, respectively. Most of the QTLs for the ratios of HLIP to non-stress collocated or nearly linked with those detected under HLIP condition. HLIP-induced QTLs were mapped on 15 chromosomes, involving in 1A, 1B, 1D, 2A, 2B, 2D, 3A, 3B, 4A, 4D, 5B, 6A, 6B, 7A, and 7D while those expressed under non-stress condition involved in nine chromosomes, includ-ing 1B, 1D, 2A, 2B, 3B, 4A, 5A, 5B, and 7A. The expression patterns of QTLs under HLIP condition were different from that under non-stress condition except for six loci on five chromosomes. The phenotypic variance explained by individual QTL ranged from 5.0% to 19.7% under HLIP, 8.3% to 20.8% under non-stress, and 4.9% to 20.2% for the ratios of HLIP to non-stress, respectively. Some markers, for example, Xgwm192 and WMC331 on 4D regulating Chl, Fo, Fm, and Fv/Fm under HLIP condition, might be used in marker assistant selection. | Hongwei Li Yiping Tong Bin Li Ruilian Jing Congming Lu Zhensheng Li | 2010 | Journal of Genetics and Genomics2010，37，6： | 10 |
| 3 | Wheat genomic study for genetic improvement of traits in China显示文摘Bread wheat(Triticum aestivum L.)is a major crop that feeds 40%of the world’s population.Over the past several decades,advances in genomics have led to tremendous achievements in understanding the origin and domestication of wheat,and the genetic basis of agronomically important traits,which promote the breeding of elite varieties.In this review,we focus on progress that has been made in genomic research and genetic improvement of traits such as grain yield,end-use traits,flowering regulation,nutrient use efficiency,and biotic and abiotic stress responses,and various breeding strategies that contributed mainly by Chinese scientists.Functional genomic research in wheat is entering a new era with the availability of multiple reference wheat genome assemblies and the development of cutting-edge technologies such as precise genome editing tools,highthroughput phenotyping platforms,sequencing-based cloning strategies,high-efficiency genetic transformation systems,and speed-breeding facilities.These insights will further extend our understanding of the molecular mechanisms and regulatory networks underlying agronomic traits and facilitate the breeding process,ultimately contributing to more sustainable agriculture in China and throughout the world. | Jun Xiao Bao Liu Yingyin Yao Zifeng Guo Haiyan Jia Lingrang Kong Aimin Zhang Wujun Ma Zhongfu Ni Shengbao Xu Fei Lu Yuannian Jiao Wuyun Yang Xuelei Lin Silong Sun Zefu Lu Lifeng Gao Guangyao Zhao Shuanghe Cao Qian Chen Kunpu Zhang Mengcheng Wang Meng Wang Zhaorong Hu Weilong Guo Guoqiang Li Xin Ma Junming Li Fangpu Han Xiangdong Fu Zhengqiang Ma Daowen Wang Xueyong Zhang Hong-Qing Ling Guangmin Xia Yiping Tong Zhiyong Liu Zhonghu He Jizeng Jia Kang Chong | 2022 | Science China(Life Sciences)2022，65，9： | 9 |
| 4 | Characterization of the promoter of phosphate transporter TaPHT1.2 differentially expressed in wheat varieties显示文摘TaPHT1.2 is a functional,root predominantly expressed and low phosphate(Pi) inducible high-affinity Pi transporter in wheat,which is more abundant in the roots of P-efficient wheat genotypes(e.g.,Xiaoyan 54) than in P-inefficient genotypes(e.g.,Jing 411) under both Pi-deficient and Pi-sufficient conditions.To characterize TaPHT1.2 further,we genetically mapped a TaPHT1.2 transporter,TaPHT1.2-D1,on the long arm of chromosome 4D using a recombinant inbred line population derived from Xiaoyan 54 and Jing 411,and isolated a 1,302 bp fragment of the TaPHT1.2-D1 promoter(PrTaPHT1.2-D1) from Xiaoyan 54.TaPHT1.2-D1 shows collinearity with OsPHT1.2 that has previously been reported to mediate the translocation of Pi from roots to shoots.PrTaPHT1.2-D contains a number of Pi-starvation responsive elements,including P1BS,WRKY-binding W-box,and helix-loop-helix-binding elements.PrTaPHT1.2-D1 was then used to drive expression of β-glucuronidase(GUS) reporter gene in Arabidopsis through Agrobacterium-mediated transformation.Histochemical analysis of transgenic Arabidopsis plants showed that the reporter gene was specifically induced by Pi-starvation and predominantly expressed in the roots.As there is only one SNP between the TaPHT1.2-D1 promoters of Xiaoyan 54 and Jing 411,and this SNP does not exist within the Pi-starvation responsive elements,the differential expression of TaPHT1.2 in Xiaoyan 54 and Jing 411 may not be caused by this SNP. | Jun Miao Jinghan Sun Dongcheng Liu Bin Li Aimin Zhang Zhensheng Li Yiping Tong | 2009 | Journal of Genetics and Genomics2009，36，8： | 8 |
| 5 | Corrected empirical likelihood for a class of generalized linear measurement error models显示文摘Generalized linear measurement error models, such as Gaussian regression, Poisson regression and logistic regression, are considered. To eliminate the effects of measurement error on parameter estimation, a corrected empirical likelihood method is proposed to make statistical inference for a class of generalized linear measurement error models based on the moment identities of the corrected score function. The asymptotic distribution of the empirical log-likelihood ratio for the regression parameter is proved to be a Chi-squared distribution under some regularity conditions. The corresponding maximum empirical likelihood estimator of the regression parameter π is derived, and the asymptotic normality is shown. Furthermore, we consider the construction of the confidence intervals for one component of the regression parameter by using the partial profile empirical likelihood. Simulation studies are conducted to assess the finite sample performance. A real data set from the ACTG 175 study is used for illustrating the proposed method. | YANG YiPing LI GaoRong TONG TieJun | 2015 | Science China Mathematics2015，58，7： | 6 |
| 6 | Evaluation of genotoxicity of combined soil pollution by cadmium and imidacloprid显示文摘Cadmium (Cd) is one of the important pollutants of soil and the genotoxicity of Cd-contaminated soil was studied in combination with imidacloprid. The single cell gel electrophoresis or comet assay was used to quantify DNA strand breaks as a measure of DNA damage induced by Cd and imidacloprid contamination in soil. The soil was artificially contaminated by Cd 2 h at 25℃ and were used in the comet assay. DNA damage was measured as the values of percentage of nuclei with tails, tail length, tail DNA, tail moment (TM), and Olive tail moment (OTM). DNA damages of root tips of Vicia faba increased after Cd treatment and there were dose-related increases in DNA damage measured as these parameters. However, the addition of imidacloprid further increased the DNA damage. These data confirmed the genotoxic effect of Cd to plants, and that the combined pollution with imidacloprid can enhance the genotoxicity of Cd. | LIN Aijun ZHU Yongguan TONG Yiping | 2005 | Science China(Life Sciences)2005，48，z1： | 6 |
| 7 | Distribution and potential of global oil and gas resources显示文摘Using conventional and unconventional oil and gas resource evaluation methods with play as a unit, this study evaluates the oil and gas geology and resource potential of conventional oil and gas resources and seven types of unconventional resources in the global major oil and gas basins(excluding China). For the first time, resource evaluation data with independent intellectual property rights has been obtained. According to evaluation and calculation, the global recoverable conventional oil resources are 5 350.0×108 t, the recoverable condensate oil resources are 496.2×108 t, and the recoverable natural gas resources are 588.4×1012 m3. The remaining oil and gas 2 P recoverable reserves are 4 212.6×108 t, the reserve growth of oil and gas fields are 1 531.7×108 t. The undiscovered oil and gas recoverable resources are 3 065.5×108 t. The global unconventional oil recoverable resources are 4 209.4×108 t and the unconventional natural gas recoverable resources are 195.4×1012 m3. The evaluation results show that the global conventional and unconventional oil and gas resources are still abundant. | TONG Xiaoguang ZHANG Guangya WANG Zhaoming WEN Zhixin TIAN Zuoji WANG Hongjun MA Feng WU Yiping | 2018 | Petroleum Exploration and Development2018，45，4： | 2 |
| 8 | Degradation of acid fuchsine by a modified electro-Fenton system with magnetic stirring as oxygen supplying显示文摘The current modified electro-Fenton system was designed to develop a more convenient and efficient undivided system for practical wastewater treatment.The system adopted a cathode portion that employed magnetic stirring instead of common oxygen gas difflusion or gas sparging to supply oxygen gas for the electrolyte solution.Key factors influencing the cathode fabrication and activity were investigated.The degradation of acid fuchsine with a self-made graphite-polytetrafluorethylene cathode was studied using a spectrophotometer.It was found that the cathode generated hydrogen peroxide with high current efficiency and the hydrogen peroxide yield of the cathode did not decay after 10 times reuse.With the Pt anode at a ferrous ion concentration of 0.5 mmol/L,a pH of 3,and using magnetic stirring,dye decolorization could be rapidly accomplished but the destruction of benzene rings and intermediates was fairly difficult.With a Fe anode,dye degradation was more complete. | Yiping Sheng,Limin Zhen,Xiuli Wang,Ning Li,Qi Tong College of Environmental and Chemical Engineering,Yanshan University,Qinhuangdao,Hebei 066004,China. | 2010 | Journal of Environmental Sciences2010，22，4： | 2 |
| 9 | Low-affinity SPL binding sites contribute to subgenome expression divergence in allohexaploid wheat显示文摘Expression divergence caused by genetic variation and crosstalks among subgenomes of the allohexaploid bread wheat(Triticum aestivum.L.,BBAADD)is hypothesized to increase its adaptability and/or plasticity.However,the molecular basis of expression divergence remains unclear.Squamosa promoter-binding protein-like(SPL)transcription factors are critical for a wide array of biological processes.In this study,we constructed expression regulatory networks by combining DAP-seq for 40 SPLs,ATACseq,and RNA-seq.Our findings indicate that a group of low-affinity SPL binding regions(SBRs)were targeted by diverse SPLs and caused different sequence preferences around the core GTAC motif.The SBRs including the low-affinity ones are evolutionarily conserved,enriched GWAS signals related to important agricultural traits.However,those SBRs are highly diversified among the cis-regulatory regions(CREs)of syntenic genes,with less than 8%SBRs coexisting in triad genes,suggesting that CRE variations are critical for subgenome differentiations.Knocking out of Ta SPL7A/B/D and Ta SPL15A/B/D subfamily further proved that both high-and low-affinity SBRs played critical roles in the differential expression of genes regulating tiller number and spike sizes.Our results have provided baseline data for downstream networks of SPLs and wheat improvements and revealed that CRE variations are critical sources for subgenome divergence in the allohexaploid wheat. | Hongcui Pei Wan Teng Lifeng Gao Hengbin Gao Xueni Ren Yanhong Liu Jizeng Jia Yiping Tong Yonghong Wang Zefu Lu | 2023 | Science China(Life Sciences)2023，66，4： | 1 |
| 10 | Utility of Triti-Map for bulk-segregated mapping of causal genes and regulatory elements in Triticeae显示文摘Triticeae species,including wheat,barley,and rye,are critical for global food security.Mapping agronomically important genes is crucial for elucidating molecular mechanisms and improving crops.However,Triticeae includes many wild relatives with desirable agronomic traits,and frequent introgressions occurred during Triticeae evolution and domestication.Thus,Triticeae genomes are generally large and complex,making the localization of genes or functional elements that control agronomic traits challenging.Here,we developed Triti-Map,which contains a suite of user-friendly computational packages specifically designed and optimized to overcome the obstacles of gene mapping in Triticeae,as well as a web interface integrating multi-omics data from Triticeae for the efficient mining of genes or functional elements that control particular traits.The Triti-Map pipeline accepts bothDNA and RNAbulk-segregated sequencing data as well as traditional QTL data as inputs for locating genes and elucidating their functions.We illustrate the usage of Triti-Map with a combination of bulk-segregated ChIP-seq data to detect a wheat disease-resistance gene with its promoter sequence that is absent from the reference genome and clarify its evolutionary process.We hope that Triti-Map will facilitate gene isolation and accelerate Triticeae breeding. | Fei Zhao Shilong Tian Qiuhong Wu Zijuan Li Luhuan Ye Yili Zhuang Meiyue Wang Yilin Xie Shenghao Zou Wan Teng Yiping Tong Dingzhong Tang Ajay Kumar Mahato Moussa Benhamed Zhiyong Liu Yijing Zhang | 2022 | Plant Communications2022，3，4： | 1 |
| 11 | Identification of quantitative trait locus of zinc and phosphorus density in wheat (Triticum aestivum L.) grain显示文摘 | Rongli Shi Hongwei Li Yiping Tong Ruilian Jing Fusuo Zhang Chunqin Zou | 2008 | Plant and Soil (-)2008，，1： | 1 |
| 12 | Mapping QTLs for Phosphorus-Deficiency Tolerance at Wheat Seedling Stage显示文摘 | Junying Su Yanmei Xiao Ming Li Quanyou Liu Bin Li Yiping Tong Jizeng Jia Zhensheng Li | 2006 | Plant and Soil2006，，1： | 1 |
| 13 | Mapping QTLs for nitrogen uptake in relation to the early growth of wheat (Triticum aestivum L.)显示文摘 | Diaoguo An Junying Su Quanyou Liu Yongguan Zhu Yiping Tong Junming Li Ruilian Jing Bin Li Zhensheng Li | 2006 | Plant and Soil (-)2006，，1： | 1 |
| 14 | Mapping QTLs for Phosphorus-Deficiency Tolerance at Wheat Seedling Stage显示文摘 | Junying Su Yanmei Xiao Ming Li Quanyou Liu Bin Li Yiping Tong Jizeng Jia Zhensheng Li | 2006 | Plant and Soil (-)2006，，1： | 1 |
| 15 | The deubiquitinase USP11 promotes ovarian cancer chemoresistance by stabilizing BIP显示文摘Dear Editor,Chemoresistance is a major problem in the treatment of ovarian cancer patients and leads to poor prognosis,but its underlying mechanism remains elusive.Accumulating evidences have found that the aberrant regulation of the protein ubiquitination pathway plays an essential role in ovarian cancer chemoresistance.13 However,it is unclear whether and how deubiquitinase-USP11 involves in ovarian cancer chemoresistance. | Xiaolin Zhu Yiping Zhang Qingyu Luo Xiaowei Wu Furong Huang Tong Shu Yong Wan Hongyan Chen Zhihua Liu | 2021 | Signal Transduction and Targeted Therapy2021，6，8： | 1 |
| 16 | Major quantitative trait loci for seminal root morphology of wheat seedlings显示文摘 | Yongzhe Ren Xue He Dongcheng Liu Jingjuan Li Xueqiang Zhao Bin Li Yiping Tong Aimin Zhang Zhensheng Li | 2012 | Molecular Breeding2012，，1： | 1 |
| 17 | Mapping QTLs for yield and nitrogen-related traits in wheat: influence of nitrogen and phosphorus fertilization on QTL expression显示文摘 | Yunfeng Xu Ruifang Wang Yiping Tong Huatian Zhao Qingen Xie Dongcheng Liu Aimin Zhang Bin Li Hongxing Xu Diaoguo An | 2014 | Theoretical and Applied Genetics2014，，1： | 1 |
| 18 | Mapping QTLs for nitrogen uptake in relation to the early growth of wheat (Triticum aestivum L.)显示文摘 | Diaoguo An Junying Su Quanyou Liu Yongguan Zhu Yiping Tong Junming Li Ruilian Jing Bin Li Zhensheng Li | 2006 | Plant and Soil (-)2006，，1： | 1 |
| 19 | Identification of quantitative trait locus of zinc and phosphorus density in wheat (Triticum aestivum L.) grain显示文摘 | Rongli Shi Hongwei Li Yiping Tong Ruilian Jing Fusuo Zhang Chunqin Zou | 2008 | Plant and Soil (-)2008，，1： | 1 |
| 20 | Mapping QTLs for Phosphorus-Deficiency Tolerance at Wheat Seedling Stage显示文摘 | Junying Su Yanmei Xiao Ming Li Quanyou Liu Bin Li Yiping Tong Jizeng Jia Zhensheng Li | 2006 | Plant and Soil (-)2006，，1： | 1 |
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