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| 1 | PlantcircBase: A Database for Plant Circular RNAs显示文摘 | Qinjie Chu Xingchen Zhang Xintian Zhu Chen Liu Lingfeng Mao Chuyu Ye Qian-Hao Zhu Longjiang Fan | 2017 | Molecular Plant2017，10，8： | 15 |
| 2 | Environmental change since mid-Pleistocene recorded in Shangshan achaeological site of Zhejiang显示文摘在迟了的时期的大约 173 ka BP 中间 -- 更新世,河的第二个平台被形成了由于因为气候,海水平变化和构造行动,高举发生在 Shangshan 区域。在 173 75 ka BP 之间。 | MAO Longjiang MO Duowen JIANG Leping JIA Yaofeng LIU Xiaoyan LI Minglin ZHOU Kunshu SHI Chenxi | 2008 | Journal of Geographical Sciences2008，18，2： | 6 |
| 3 | Paleosalinity in the Tianluoshan site and the correlation between the Hemudu culture and its environmental background显示文摘Tianluoshan 地点的 Paleosalinity 记录从泥土矿物质的 measurations 数据被导出,硼,锶,钡,在在 Tianluoshan 地点的三侧面的领域采样以后。相对的海水平变化根据实验室结果被讨论。记录显示 Tianluoshan 地点定位了的区域见证以前高看台的水平至少三次相对的海,在期间并且在 Hemudu 时期以后。基于以前的研究,这篇论文也集中于包括地讨论 Hemudu 文化的几个环境元素,在环境状况之间的相互关系,人的活动和开发。 | LI Minglin MO Duowen MAO Longjiang SUN Guoping ZHOU Kunshu | 2010 | Journal of Geographical Sciences2010，20，3： | 4 |
| 4 | The Genomes of the Allohexaploid Echinochloa crus-galli and Its Progenitors Provide Insights into Polyploidization-Driven Adaptation显示文摘The hexaploid species Echinochloa crus-galli is one of the most detrimental weeds in crop fields,especially in rice paddies.Its evolutionary history is similar to that of bread wheat,arising through polyploidization after hybridization between a tetraploid and a diploid species.In this study,we generated and analyzed high-quality genome sequences of diploid(E.haploclada),tetraploid(E.oryzicola),and hexaploid(E.crus-galli)Echinochloa species.Gene family analysis showed a significant loss of disease-resistance genes such as those encoding NB-ARC domain-containing proteins during Echinochloa polyploidization,contrary to their significant expansionduring wheat polyploidization,suggesting that natural selection might favor reduced investment in resistance in this weed to maximize its growth and reproduction.In contrast to the asymmetric patterns of genome evolution observed in wheat and other crops,no significant differences in selection pressure were detected between the subgenomes in E.oryzicola and E.crus-galli.In addition,distinctive differences in subgenome transcriptome dynamics during hexaploidization were observed between E.crus-galli and bread wheat.Collectively,our study documents genomic mechanisms underlying the adaptation of a major agricultural weed during polyploidization.The genomic and transcriptomic resources of three Echinochloa species and new insights into the polyploidization-driven adaptive evolution would be useful for future breeding cereal crops. | Chu-Yu Ye Dongya Wu Lingfeng Mao Lei Jia Jie Qiu Sangting Lao Meihong Chen Bowen Jiang Wei Tang Qiong Peng Lang Pan Lifeng Wang Xiaoxiao Feng Longbiao Guo Chulong Zhang Elizabeth A.Kellogg Kenneth M.Olsen Lianyang Bai Longjiang Fan | 2020 | Molecular Plant2020，13，9： | 4 |
| 5 | Concentration and pollution assessment of hazardous metal elements in sediments of the Xiangjiang River, China显示文摘 | Mao Longjiang Mo Duowen Yang Jinghong | 2013 | J Radioanal Nucl Chem2013，295，1： | 1 |
| 6 | Predicting Ecological Distribution of the Toxic Dinoflagellate Alexandrium minutum in China Sea Using Ecological Niche Modeling显示文摘Alexandrium minutum from the China Sea produces a range of toxins and causes damage to the local ecosystems and aquaculture.This is essential to understand environmental factors affecting potential distribution.Potential distributions of A.minutum in the China Sea were predicted based on maximum entropy modeling,and dominant environmental variables were studied through analyses of variable contributions and response curves.The results showed that highly suitable areas were mainly located in the southwest of the Yellow Sea,the Laizhou Bay,and north of Haizhou Bay.The coast of the South China Sea was predicted as a low-suitability area,and the coast of the East China Sea as an unsuitable area.Mean temperature of the coldest month(T_min)had the largest drop in permutation importance but a low percent contribution.The probability of presence of A.minutum increased with increasing concentration of nitrate(NO3−)and annual mean temperature(T_ann)over a wide range of them.The response curves decreased with increasing concentration of phosphate(PO43−)and ratio of NO_(3)^(−)to PO_(4)^(3−)(N_P_ratio)when PO_(4)^(3)−is above 0.049μmolL^(-1) and N_P_ratio above 4,indicating that low values of PO_(4)^(3−) concentration and N_P_ratio favour the occurrence of A.minutum.As a predictor,the variance of annual temperature(T_Var)had the highest percent contribution and gains.PO_(4)^(3−) was predicted to have much more information than the other variables,and exhibited the second largest drop in permutation importance and percent contribution.The T_Var and PO_(4)^(3−) are the most important dominant predictor variables. | WANG Changyou ZHENG Ping GU Haifeng LUO Zhaohe LUO Zhuhua MAO Longjiang ZHANG Yuanzhi | 2023 | Journal of Ocean University of China2023，22，4： | 0 |
| 7 | Role of Resuspended Sediments as Sources of Dissolved Inorganic Phosphorus Along Different Dimensions in the Subei Shoal, South Yellow Sea, China显示文摘Several studies have documented that during‘green tide’events,comprising green macroalgae blooms in aquatic ecosystems,dissolved inorganic phosphorus(DIP)levels remain relatively steady despite the absorption of a large amount of DIP.In this study,surface sediment samples and a sediment core were extracted using a modified sequential extraction scheme,and water and surface sediment samples were analyzed in April 2017 to better understand phosphorus(P)cycling and replenishment in Subei shoal.We used a simple model on equilibrium of adsorption-desorption to present the buffering capacity of phosphate.The total P(TP)in the surface sediments ranged from 12.2 to 28.4μmol g^(-1)(average 15.5μmol g^(-1))and was dominated by inorganic P.TP,exchangeable P,reactive and reductive Fe/Al bound P,and authigenic apatite P significantly decreased northward and eastward from Subei shoal,contrary to the detrital P and organic P results.Dissolved and particulate inorganic P in the water samples ranged from 0.01 to 0.54μmol L^(-1)(average 0.19μmol L^(-1))and 0.9 to 19.6μmol g^(-1)(average 4.9μmol g^(-1)),respectively.The applied model showed that suspended particulate matter is an important regulator of DIP behavior.Thus,modification of SPM can alter the DIP buffering capacity.The calculated buffering capacity in the surface layer of the sea water was>60 within Subei shoal and always>10 along the path of floating Ulva prolifera,providing a reasonable explanation for the steady concentration of DIP and its replenishment during the blooming of this green macroalgae. | WANG Changyou ZHENG Ping SU Rongguo LUO Zhuhua ZHANG Yuanzhi MAO Longjiang | 2023 | Journal of Ocean University of China2023，22，1： | 0 |
| 8 | PlantcircBase 7.0:Full-length transcripts and conservation of plant circRNAs显示文摘Circular RNA(circRNA)is a special type of non-coding RNA that participates in diverse biological processes in both animals and plants.Five years ago,we developed a comprehensive plant circRNA database(PlantcircBase),which has attracted much attention from the plant circRNA community.Here,we report an updated PlantcircBase(v.7.0),which contains 171,118 circRNAs from 21 plant species.Over 31,000 of the circRNAs have full-length sequences constructed based on analysis of 749 bulk RNA sequencing(RNAseq)datasets downloaded from the public domain and Nanopore long-read sequencing results of rice RNAs newly generated in this study.A plant multiple conservation score(PMCS),based on the conservation of both sequence and expression profiles,was calculated for each circRNA to quantify and compare the conservation of all circRNAs.A new parameter,plant circRNA confidence level(PCCL),is introduced to measure the identity reliability of each circRNA based on experimental validation results and the number of references that support the circRNA.All this information and other details of circRNAs can be browsed,searched,and downloaded from PlantcircBase 7.0,which also provides online bioinformatics tools for visualization and sequence alignment.PlantcircBase 7.0 is publicly and freely accessible at http://gffzzbe43f054107d49d7hw590pbovnf956w0o.ffgz.tsg.suse.edu.cn/plantcircbase/. | Xiaoxu Xu Tianyu Du Weihua Mao Xiaohan Li Chu-Yu Ye Qian-Hao Zhu Longjiang Fan Qinjie Chu | 2022 | Plant Communications2022，3，4： | 0 |
| 9 | Influences of MJO-induced Tropical Cyclones on the Circulation-Convection Inconsistency for the 2021 South China Sea Summer Monsoon Onset显示文摘The South China Sea Summer Monsoon(SCSSM)onset is characterized by an apparent seasonal conversion of circulation and convection.Accordingly,various indices have been introduced to identify the SCSSM onset date.However,the onset dates as determined by various indices can be very inconsistent.It not only limits the determination of onset dates but also misleads the assessment of prediction skills.In 2021,the onset time as identified by the circulation criteria was 20 May,which is 12 days earlier than that deduced by also considering the convection criteria.The present study mainly ascribes such circulation-convection inconsistency to the activities of tropical cyclones(TCs)modulated by the Madden-Julian Oscillation(MJO).The convection of TC“Yaas”(2021)acted as an upper-level diabatic heat source to the north of the SCS,facilitating the circulation transition.Afterward,TC“Choi-wan”(2021)over the western Pacific aided the westerlies to persist at lower levels while simultaneously suppressing moist convection over the SCS.Accurate predictions using the ECMWF S2S forecast system were obtained only after the MJO formation.The skillful prediction of the MJO during late spring may provide an opportunity to accurately predict the establishment of the SCSSM several weeks in advance. | Yanying CHEN Ning JIANG Yang AI Kang XU Longjiang MAO | 2023 | Advances in Atmospheric Sciences2023，40，2： | 0 |
| 10 | Sedimentary record of a late Holocene storm event in Laizhou Bay,Bohai Sea,China显示文摘The Bohai Sea is influenced by numerous extreme oceanic wave events in history.However,it is often difficult to determine the types of these events due to the lack of detailed historical records,causing uncertainty in the reconstruction of historical coastal disasters.We investigated an anomalous sand layer in the Xiliyu Village by the coast of Laizhou Bay,Shandong,from which an extreme event deposit was identified using a multi-proxy approach including grain size distribution,geochemistry,and magnetic susceptibility.This event was dated 2700–3100 a bp,and caused inundation of a large coastal area of Laizhou Bay.By comparing historical records with instrumental data,we believe that the event deposit was generated by a severe storm surge with wind speed of>34.9 m/s. | Zhenqiao LIU Liang ZHOU Shu GAO Longjiang MAO Peng LU | 2023 | Journal of Oceanology and Limnology2023，41，3： | 0 |
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