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| 1 | Genome-wide association analysis identified molecular markers associated with important tea flavor-related metabolites显示文摘The characteristic secondary metabolites in tea(theanine,caffeine,and catechins)are important factors contributing to unique tea flavors.However,there has been relatively little research on molecular markers related to these metabolites.Thus,we conducted a genome-wide association analysis of the levels of these tea flavor-related metabolites in three seasons.The theanine,caffeine,and catechin levels in Population 1 comprising 191 tea plant germplasms were examined,which revealed that their heritability exceeded 0.5 in the analyzed seasons,with the following rank order(highest to lowest heritabilities):(+)-catechin>(−)-gallocatechin gallate>caffeine=(−)-epicatechin>(−)-epigallocatechin-3-gallate>theanine>(−)-epigallocatechin>(−)-epicatechin-3-gallate>catechin gallate>(+)-gallocatechin.The SNPs detected by amplified-fragment SNP and methylation sequencing divided Population 1 into three groups and seven subgroups.An association analysis yielded 307 SNP markers related to theanine,caffeine,and catechins that were common to all three seasons.Some of the markers were pleiotropic.The functional annotation of 180 key genes at the SNP loci revealed that FLS,UGT,MYB,and WD40 domain-containing proteins,as well as ATP-binding cassette transporters,may be important for catechin synthesis.KEGG and GO analyses indicated that these genes are associated with metabolic pathways and secondary metabolite biosynthesis.Moreover,in Population 2(98 tea plant germplasm resources),30 candidate SNPs were verified,including 17 SNPs that were significantly or extremely significantly associated with specific metabolite levels.These results will provide a foundation for future research on important flavor-related metabolites and may help accelerate the breeding of new tea varieties. | Kaixing Fang Zhiqiang Xia Hongjian Li Xiaohui Jiang Dandan Qin Qiushuang Wang Qing Wang Chendong Pan Bo Li Hualing Wu | 2021 | Horticulture Research2021，8，1： | 10 |
| 2 | Study on Dendritic Growth in Pressurized Solidification of Mg–Al Alloy Using Phase Field Simulation显示文摘A multi-grain phase field model coupled with thermodynamic calculation was adopted to describe the dendritic growth in pressurized solidification of Mg–Al alloy during squeeze casting,in which the effects of the pressure on the Gibbs free energy and chemical potential of solid and liquid phases,the solute diffusion coefficient,and the solute partition coefficient were considered. The individual effect of solute diffusion coefficient,and the Gibbs free energy on the dendritic growth was studied. With the comparison of the dendritic growth under atmospheric and elevated pressures,the effect of pressure on the microstructure evolution was discussed. The results showed that the grains are refined,the dendritic growth rate tends to increase and the secondary dendrite arms are more developed as the pressure is increased from 0.1 to 100 MPa,which showed a good agreement with the experimental results of direct squeeze casting of Mg–Al alloy. As the pressure increases,the largest dendritic growth rate can be obtained under the pressure between 200 and 250 MPa,while the growth rate decreases with a further increase of pressure. | Haowei Pan Zhiqiang Han Baicheng Liu | 2016 | Journal of Materials Science & Technology2016，32，1： | 9 |
| 3 | Climate change and its effect on reference crop evapotranspiration in central and western Inner Mongolia during 1961-2009显示文摘水资源是到在中央、西方的内部蒙古的农业生产的主要限制之一,在的地方由干旱、半干旱的气候是特征的。参考庄稼土壤水分蒸发蒸腾损失总量(et 0 ) 是在农业生态系统的水周期的重要部分,它在庄稼生长和产量上有直接效果。et 0 上的气候变化的含意具有为关于安排的水管理和灌溉的农业的高重要性。这研究的目的是在时期上在在中央、西方的内部蒙古的 et 0 上在气候和它的效果分析变化 1961 ~ 2009。为这个目的,在越过学习区域的十个气象学的车站的数据被收集, FAO Penman-Monteith 56 方法被使用。结果证明平均温度,最大的温度和最小的温度由 0.49 莬增加了吗?? | Di HE Yaling LIU Zhihua PAN Pingli AN Liwei WANG Zhiqiang DONG Jingting ZHANG Xuebiao PAN Peiyi ZHAO | 2013 | Frontiers of Earth Science2013，7，4： | 8 |
| 4 | The City Intelligence Quotient (City IQ) Evaluation System" Conception and Evaluation显示文摘 | Zhiqiang Wu Yunhe Pan Qiming Ye Lingyu Kong | 2016 | Engineering2016，2，2： | 7 |
| 5 | Study on the relative radiometric correction of CBERS satellite CCD image显示文摘The main payload on CBERS-01/02 of China-Brazil Earth Resources Satellite (CBERS) is a push-broom CCD camera with moderate spatial and radiant resolution. Because at lab the data for calibration at satellite assembly stage were unable to be collected, and also because the onboard calibrator after launch was in a different state from imaging, the calibration of CCD image got a series of difficulties involved. In practice, two methods are used in the processing on the ground station: One is extracting calibration data by statistics from the image itself, and the other is the method of histogram match. It was proved that the latter can calibrate the image much better, because it can remove the effect of unstable response of the camera largely and also can overcome the nonlinearity of the camera basically by using Look-Up Table (LUT) calculated from histogram statistics of different temporal images. Considering the problems of CBERS-01, a lot of calibration tests were done before the launch of CBERS-02, in which a set of lab coefficients for relative calibration was formulated after the data collection by using integration-hemisphere in the stage of satellite assembly test. During the on-orbit test, it was found that the calibration result from such coefficients was not satisfying, especially there being response difference between 3 detector arrays, which was attributed to the unstable dark currents of the CCD camera. This paper comes up with a statistic method to remove such response difference. In this method the middle detector array was used as reference to find the response differences of adjacent similar features between these arrays and it was proved to have a broad adaptability. | GUO Jianning, YU Jin, ZENG Yong, XU Jianyan, PAN Zhiqiang & HOU Minghui China Center for Resource Satellite Data and Application, Beijing 100830, China | 2005 | Science China(Technological Sciences)2005，48，S2： | 6 |
| 6 | PpERF3 positively regulates ABA biosynthesis by activating PpNCED2/3 transcription during fruit ripening in peach显示文摘The plant hormone ethylene regulates ripening in climacteric fruits.The phytohormone abscisic acid(ABA)affects ethylene biosynthesis,but whether ethylene influences ABA biosynthesis is unknown.To explore this possibility,we investigated the interactions between the ABA biosynthesis genes PpNCED2/3 and the ethylene response transcription factor PpERF3 in peach fruit.The ABA content increased during fruit maturation and reached a peak at stage S4 III.The increase was greatly inhibited by the ethylene inhibitor 1-MCP,which also suppressed PpERF3 expression.PpERF3 shared a similar expression profile with PpNCED2/3,encoding a rate-limiting enzyme involved in ABA biosynthesis,during fruit ripening.A yeast one-hybrid assay suggested that the nuclear-localized PpERF3 might bind to the promoters of PpNCED2/3.PpERF3 increased the expression of PpNCED2/3 as shown by dual-luciferase reporters,promoter-GUS assays and transient expression analyses in peach fruit.Collectively,these results suggest that ethylene promotes ABA biosynthesis through PpERF3’s regulation of the expression of ABA biosynthesis genes PpNCED2/3. | Xiaobei Wang Wenfang Zeng Yifeng Ding Yan Wang Liang Niu Jia-Long Yao Lei Pan Zhenhua Lu Guochao Cui Guohuai Li Zhiqiang Wang | 2019 | Horticulture Research2019，6，1： | 5 |
| 7 | Carbon uptake and change in net primary productivity of oasis-desert ecosystem in arid western China with remote sensing technique显示文摘Arid and semi-arid ecosystems exhibit a spatially complex biogeophysical structure. According to arid western special climate-vegetation characters, the fractional cover of photosynthetic vegetation (PV), non-photosynthetic vegetation (NPV), bare soil and water are unmixed, using the remote sensing spectral mixture analysis. We try the method to unmix the canopy funation structure of arid land cover in order to avoid the differentiation of regional vegetation system and the disturbance of environmental background. We developed a modified production efficiency model NPP-PEM appropriate for the arid area at regional scale based on the concept of radiation use efficiency. This model refer to the GLO-PEM and CASA model was driven with remotely sensed observations, and calculates not just the conversion efficiency of absorbed photosynthetically active radiation but also the carbon fluxes that determine net primary productivity (NPP). We apply and validate the model in the Kaxger and Yarkant river basins in arid western China. The NPP of the study area in 1992 and 1998 was estimated based on the NPP-PEM model. The results show that the improved PEM model, considering the photosynthetical activation of heterogeneous functional vegetation, is in good agreement with field measurements and the existing literature. An accurate agreement (R2 = 0.85, P<0.001) between the estimates and the ground-based measurement was obtained. The spatial distribution of mountain-oasis-desert ecosystem shows an obvious heterogeneous carbon uptake. The results are applicable to arid ecosystem studies ranging from characterizing carbon cycle, carbon flux over arid areas to monitoring change in mountain-oasis-desert productivity, stress and management. | ZHANG Jie PAN Xiaoling GAO Zhiqiang SHI Qingdong LV Guanghui | 2006 | Journal of Geographical Sciences2006，16，3： | 4 |
| 8 | Temporal Evolution of Carbon Storage in Chinese Tea Plantations from 1950 to 2010显示文摘Tea(Camellia sinensis),an economically important crop grown in mountain regions,has been planted for thousands of years in South China.Tea plantations can potentially act as carbon(C) sink in local agrosystems due to their high plant biomass and provide soil conservation service.To assess the contribution of tea plantations to C sequestration,the chronosequence variations of C storage were assessed in the plants and soils(0-20 cm) of tea plantations in China from 1950 to 2010,and then the inter-annual and decadal variabilities of total C storage were estimated.Total C stocks in tea plants and soils in 2010 were 34.4 and 93.45 Tg,respectively.Carbon sequestration from 1950 to 2010 was 30.6 and 39.0 Tg in the plants and soils,respectively.The highest C sequestration happened during the 1980 s and the lowest during the 1950 s.The decadal average C sequestration rate ranged from 20.4 to 113.9 g m^(-2) year^(-1) in the standing tea plants,and from 54.6 to 98.8 g m^(-2) year^(-1) in soils during the period of 1950 to 2010.The average ratio of C storage in soils to that in plants was 3.00 ± 0.35 before 1970 and 2.44 ± 0.18 after 1970.The results suggested that tea plantation ecosystems made an important contribution to the C sinks in Chinese tea-producing regions. | ZHANG Min CHEN Yonggen FAN Dongmei ZHU Qing PAN Zhiqiang FAN Kai WANG Xiaochang | 2017 | Pedosphere2017，27，1： | 3 |
| 9 | Comparative transcriptomics revealed enhanced light responses, energy transport and storage in domestication of cassava(Manihot esculenta)显示文摘Cassava is a staple food, feed and bioenergy crop important to the world especially in the tropics.Domesticated cassava is characterized by powerful carbohydrate accumulation but its wild progenitor is not.Here, we investigated the transcriptional differences of eight c DNA libraries derived from developing leaf, stem and storage root of cassava cv. Arg7 and an ancestor line,W14, using next generation sequencing system. A total of41302 assembled transcripts were obtained and from these,25961 transcripts with FPKM≥3 in at least one library were named the expressed genes. A total of 2117, 1963 and3584 transcripts were found to be differentially expressed in leaf, stem and storage root(150 d after planting),respectively, between Arg7 and W14 and ascribed to 103,93 and 119 important pathways in leaf, stem and storage root, respectively. The highlight of this work is that the genes involved in light response, such as those for photosystem I(PSA) and photosystem II(PSB), other genes involved in light harvesting, and some of the genes in the Calvin cycle of carbon fixation were specially upregulated in leaf. Genes for transport and also for key rate-limiting enzymes(PFK, PGK and PK, GAPDH)coupling ATP consumption in glycolysis pathway were predominantly expressed in stem, and genes for sucrose degradation(INVs), amylose synthesis(GBSS) and hydrolysis(RCP1, AMYs), the three key steps of starch metabolism, and transport associated with energy translocation(ABC, AVPs and ATPase) and their upstream transcription factors had enhanced expression in storage root in domesticated cassava. Co-expression networks among the pathways in each organs revealed therelationship of the genes involved, and uncovered some of the important hub genes and transcription factors targeting genes for photosynthesis, transportation and starch biosynthesis. | Zhiqiang XIA Xin CHEN Cheng LU Meiling ZOU Shujuan WANG Yang ZHANG Kun PAN Xincheng ZHOU Haiyan WANG Wenquan WANG | 2016 | Frontiers of Agricultural Science and Engineering2016，3，4： | 3 |
| 10 | Dynamic analysis of evapotranspiration based on remote sensing in Yellow River Delta显示文摘Evapotranspiration (ET) is an important parameter for water resource management. Compared to the traditional ET computation and measurement methods, the ET computation method based on remote sensing has the advantages of quickness, precision, raster mapping and regional scale. SEBAL, an ET computation model using remote sensing method is based on the surface energy balance equation which is a function of net radiance flux, soil heat flux, sensible heat flux and latent heat flux. The former three fluxes can be computed through the parameters retrieved from remote sensing image, then the latent heat flux can be obtained to provide energy for ET. Finally we can obtain the daily ET. In this study SEBAL was applied to compute ET in the Yellow River Delta of China where water resource faces a rigorous situation. Three Landsat TM images and meteorology data of 1999 were used for ET computation, and spatial and temporal change patterns of ET in the Yellow River Delta were analysed. | PAN Zhiqiang, LIU Gaohuan, ZHOU Chenghu(State Key Laboratory of Resource and Environment Information System, Institute ofGeographic Sciences and Natural Resources Research, CAS, Beijing 100101, China) | 2003 | Journal of Geographical Sciences2003，13，4： | 3 |
| 11 | Discrimination of oolong tea ( Camellia sinensis ) varieties based on feature extraction and selection from aromatic profiles analysed by HS-SPME/GC–MS显示文摘 | Jie Lin Pan Zhang Zhiqiang Pan Hairong Xu Yaoping Luo Xiaochang Wang | 2013 | Food Chemistry2013，，1： | 2 |
| 12 | Application of an antibody chip for screening differentially expressed proteins during peach ripening and identification of a metabolon in the SAM cycle to generate a peach ethylene biosynthesis model显示文摘Peach(Prunus persica)is a typical climacteric fruit that produces ethylene rapidly during ripening,and its fruit softens quickly.Stony hard peach cultivars,however,do not produce large amounts of ethylene,and the fruit remains firm until fully ripe,thus differing from melting flesh peach cultivars.To identify the key proteins involved in peach fruit ripening,an antibody-based proteomic analysis was conducted.A mega-monoclonal antibody(mAb)library was generated and arrayed on a chip(mAbArray)at a high density,covering~4950 different proteins of peach.Through the screening of peach fruit proteins with the mAbArray chip,differentially expressed proteins recognized by 1587 mAbs were identified,and 33 corresponding antigens were ultimately identified by immunoprecipitation and mass spectrometry.These proteins included not only important enzymes involved in ethylene biosynthesis,such as ACO1,SAHH,SAMS,and MetE,but also novel factors such as NUDT2.Furthermore,protein–protein interaction analysis identified a metabolon containing SAHH and MetE.By combining the antibody-based proteomic data with the transcriptomic and metabolic data,a mathematical model of ethylene biosynthesis in peach was constructed.Simulation results showed that MetE is an important regulator during peach ripening,partially through interaction with SAHH. | Wenfang Zeng Liang Niu Zhaohui Wang Xiaobei Wang Yan Wang Lei Pan Zhenhua Lu Guochao Cui Weining Weng Mingqiao Wang Xun Meng Zhiqiang Wang | 2020 | Horticulture Research2020，7，1： | 2 |
| 13 | The Controllable Design of Catalyst Inks to Enhance PEMFC Performance:A Review显示文摘Typical catalyst inks in proton exchange membrane fuel cells(PEMFCs)are composed of a catalyst,its support,an ionomer and a solvent and are used with solution processing approaches to manufacture conventional catalyst layers(CLs).Because of this,catalyst ink formulation and deposition processes are closely related to CL structure and performance.However,catalyst inks with ideal rheology and optimized electrochemical performances remain lacking in the large-scale application of PEMFCs.To address this,this review will summarize current progress in the formulation,characterization,modeling and deposition of catalyst inks.In addition,this review will highlight recent advancements in catalyst ink materials and discuss corresponding complex interactions.This review will also present various catalyst ink dispersion methods with insights into their stability and introduce the application of small-angle scattering and cryogenic transmission electron microscopy(cryo-TEM)technologies in the characterization of catalyst ink microstructures.Finally,recent studies in the kinetic modeling and deposition of catalyst inks will be analyzed. | Yuqing Guo Fengwen Pan Wenmiao Chen Zhiqiang Ding Daijun Yang Bing Li Pingwen Ming Cunman Zhang | 2021 | Electrochemical Energy Reviews2021，4，1： | 2 |
| 14 | Structural Comparison and Drug Screening of Spike Proteins of Ten SARS-CoV-2 Variants显示文摘SARS-CoV-2(severe acute respiratory syndrome coronavirus 2)has evolved many variants with stronger infectivity and immune evasion than the original strain,including Alpha,Beta,Gamma,Delta,Epsilon,Kappa,lota,Lambda,and 21H strains.Amino acid mutations are enriched in the spike protein of SARS CoV-2.which plays a crucial role in cell infetion.However,the impact of these mutations on protein structure and function is unclear.Understanding the pathophysiology and pandemic feaures of these SARS-CoV-2 variants requires knowledge of the spike protein structures.Here,we obtained the spike protein structures of 10 main globally endemic SARS CoV-2 strains using AlphaFold2.The clustering analysis based on structural similarity revealed the unique features of the mainly pandemic SARS CoV-2 Delta variants.indicating that structural clusters can reflect the current characteristics of the epidemic more accurately than those based on the protein sequence.The analysis of the binding afinities of ACE2-RBD,antibody-NTD,and antibody-RBD complexes in the different variants revealed that the recognition of antibodies against SI NTD and RBD was decreased in the variants,especally the Delta variant compared with the original strain,which may induce the immune evasion of SARS-CoV-2 variants.Furthermore,by virtual screening the ZINC database against a high-accuracy predicted structure of Delta spike protein and experimental validation,we identified multiple compounds that target S1 NTD and RBD,which might contribute towards the development of clinical anti-SARS-CoV-2 medicines.Our findings provided a basic foundation for future in vitro and in vivo investigations that might speed up the development of potential therapies for the SARS-CoV-2 va riants. | Qiangzhen Yang Xuemin Jian Ali Alamdar Shah Syed Aamir Fahira Chenxiang Zheng zijia Zhu Ke Wang Jinmai Zhang Yangin Wen Zhiqiang Li Dun Pan Tingting Lu Zhuo Wang Yongyong Shi | 2022 | Research2022，，2： | 2 |
| 15 | Universal enzymatic numerical P systems with small number of enzymatic variables显示文摘Numerical P systems(for short, NP systems) are distributed and parallel computing models inspired from the structure of living cells and economics. Enzymatic numerical P systems(for short, ENP systems) are a variant of NP systems, which have been successfully applied in designing and implementing controllers for mobile robots. Since ENP systems were proved to be Turing universal, there has been much work to simplify the universal systems, where the complexity parameters considered are the number of membranes, the degrees of polynomial production functions or the number of variables used in the systems.Yet the number of enzymatic variables, which is essential for ENP systems to reach universality, has not been investigated. Here we consider the problem of searching for the smallest number of enzymatic variables needed for universal ENP systems. We prove that for ENP systems as number acceptors working in the all-parallel or one-parallel mode, one enzymatic variable is sufficient to reach universality; while for the one-parallel ENP systems as number generators, two enzymatic variables are sufficient to reach universality.These results improve the best known results that the numbers of enzymatic variables are 13 and 52 for the all-parallel and one-parallel systems, respectively. | Zhiqiang ZHANG Tingfang WU ANDrei PAUN Linqiang PAN | 2018 | Science China(Information Sciences)2018，61，9： | 2 |
| 16 | Involvement of facultative apomixis in inheritance of EPSPS gene amplification in glyphosate-resistant Amaranthus palmeri显示文摘 | Daniela N. Ribeiro Zhiqiang Pan Stephen O. Duke Vijay K. Nandula Brian S. Baldwin David R. Shaw Franck E. Dayan | 2014 | Planta2014，，1： | 1 |
| 17 | Pulsed inert gas metal arc welding with feed back control显示文摘 | Pan Jiluan Ou Zhiming Wu Zhiqiang | 1985 | Schweissen und Schneiden1985，37，4： | 1 |
| 18 | Targeting TRMT5 suppresses hepatocellular carcinoma progression via inhibiting the HIF-1αpathways显示文摘Accumulating evidence has confirmed the links between transfer RNA(tRNA)modifications and tumor progression.The present study is the first to explore the role of tRNA methyltransferase 5(TRMT5),which catalyzes the m1G37 modification of mitochondrial tRNAs in hepatocellular carcinoma(HCC)progression.Here,based on bioinformatics and clinical analyses,we identified that TRMT5 expression was upregulated in HCC,which correlated with poor prognosis.Silencing TRMT5 attenuated HCC proliferation and metastasis both in vivo and in vitro,which may be partially explained by declined extracellular acidification rate(ECAR)and oxygen consumption rate(OCR).Mechanistically,we discovered that knockdown of TRMT5 inactivated the hypoxia-inducible factor-1(HIF-1)signaling pathway by preventing HIF-1αstability through the enhancement of cellular oxygen content.Moreover,our data indicated that inhibition of TRMT5 sensitized HCC to doxorubicin by adjusting HIF-1α.In conclusion,our study revealed that targeting TRMT5 could inhibit HCC progression and increase the susceptibility of tumor cells to chemotherapy drugs.Thus,TRMT5 might be a carcinogenesis candidate gene that could serve as a potential target for HCC therapy. | Qiong ZHAO Luwen ZHANG Qiufen HE Hui CHANG Zhiqiang WANG Hongcui CAO Ying ZHOU Ruolang PAN Ye CHEN | 2023 | Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)2023，24，1： | 1 |
| 19 | EPSPS gene amplification in glyphosate‐resistant Italian ryegrass ( Lolium perenne ssp. multiflorum ) from Arkansas显示文摘 | Reiofeli A Salas Franck E Dayan Zhiqiang Pan Susan B Watson James W Dickson Robert C Scott Nilda R Burgos | 2012 | Pest. Manag. Sci2012，，9： | 1 |
| 20 | Biorthogonal nonuniform B-spline wavelets based on a discrete norm显示文摘 | Pan Rijing Yao Zhiqiang | 2009 | Computer Aided Geo- metric Design2009，26，4： | 1 |
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