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| 1 | Performance of integrated optical switches based on 2D materials and beyond显示文摘Applications of optical switches,such as signal routing and data-intensive computing,are critical in optical interconnects and optical computing.Integrated optical switches enabled by two-dimensional(2D)materials and beyond,such as graphene and black phosphorus,have demonstrated many advantages in terms of speed and energy consumption compared to their conventional silicon-based counterparts.Here we review the state-of-the-art of optical switches enabled by 2D materials and beyond and organize them into several tables.The performance tables and future projections show the frontiers of optical switches fabricated from 2D materials and beyond,providing researchers with an overview of this field and enabling them to identify existing challenges and predict promising research directions. | Yuhan YAO Zhao CHENG Jianji DONG Xinliang ZHANG | 2020 | Frontiers of Optoelectronics2020，13，2： | 8 |
| 2 | The telomere-to-telomere genome of Fragaria vesca reveals the genomic evolution of Fragaria and the origin of cultivated octoploid strawberry显示文摘Fragaria vesca,commonly known as wild or woodland strawberry,is the most widely distributed diploid Fragaria species and is native to Europe and Asia.Because of its small plant size,low heterozygosity,and relative ease of genetic transformation,F.vesca has been a model plant for fruit research since the publication of its Illumina-based genome in 2011.However,its genomic contribution to octoploid cultivated strawberry remains a long-standing question.Here,we de novo assembled and annotated a telomere-to-telomere,gap-free genome of F.vesca‘Hawaii 4’,with all seven chromosomes assembled into single contigs,providing the highest completeness and assembly quality to date.The gap-free genome is 220785082 bp in length and encodes 36173 protein-coding gene models,including 1153 newly annotated genes.All 14 telomeres and seven centromeres were annotated within the seven chromosomes.Among the three previously recognized wild diploid strawberry ancestors,F.vesca,F.iinumae,and F.viridis,phylogenomic analysis showed that F.vesca and F.viridis are the ancestors of the cultivated octoploid strawberry F.×ananassa,and F.vesca is its closest relative.Three subgenomes of F.×ananassa belong to the F.vesca group,and one is sister to F.viridis.We anticipate that this high-quality,telomere-to-telomere,gap-free F.vesca genome,combined with our phylogenomic inference of the origin of cultivated strawberry,will provide insight into the genomic evolution of Fragaria and facilitate strawberry genetics and molecular breeding. | Yuhan Zhou Jinsong Xiong Ziqiang Shu Chao Dong Tingting Gu Pengchuan Sun Shuang He Mian Jiang Zhiqiang Xia Jiayu Xue Wasi Ullah Khan Fei Chen Zong-Ming Cheng | 2023 | Horticulture Research2023，10，4： | 4 |
| 3 | In situ monitoring of atmospheric nitrous acid based on multi-pumping flow system and liquid waveguide capillary cell显示文摘In the last four decades, various techniques including spectroscopic, wet chemical and mass spectrometric methods, have been developed and applied for the detection of ambient nitrous acid(HONO). We developed a HONO detection system based on long path photometry which consists of three independent modules i.e., sampling module, fluid propulsion module and detection module. In the propulsion module, solenoid pumps are applied. With solenoid pumps the pulsed flow can be computer controlled both in terms of pump stroke volume and pulse frequency, which enables the attainment of a very stable flow rate. In the detection module, a customized Liquid Waveguide Capillary Cell(LWCC) is used. The customized LWCC pre-sets the optical fiber in-coupling with the liquid wave guide, providing the option of fast startup and easy maintenance of the absorption photometry. In summer 2014, our system was deployed in a comprehensive campaign at a rural site in the North China Plain. More than one month of high quality HONO data spanning from the limit of detection to 5 ppb were collected. Intercomparison of our system with another established system from Forschungszentrum Juelich is presented and discussed. In conclusion, our instrument achieved a detection limit of 10 ppt V within2 min and a measurement uncertainty of 7%, which is well suited for investigation of the HONO budget from urban to rural conditions in China. | Yuhan Liu Keding Lu Huabin Dong Xin Li Peng Cheng Qi Zou Yusheng Wu Xingang Liu Yuanhang Zhang | 2016 | Journal of Environmental Sciences2016，28，5： | 4 |
| 4 | Brain Network Analysis of Schizophrenia Based on the Functional Connectivity显示文摘Network analysis based on graph theory has greatly promoted the cognition of the human brain network. A detailed brain network function connection analysis was carried out for the brain of normal human brain and mental illness patients. We studied the Magnetoencephalography(MEG) of 9 normal subjects and9 schizophrenics in left hemisphere temporal lobe and frontal lobe regions. And obtained the dynamic function connectivity matrix by calculating Pearson correlation coefficients that based on sliding time window and shorttime Fourier transform, and constructed weight and binary network by graph theory. Analyzed the small world properties of normal human brain networks, and compared the differences of network between normal subjects and patients with schizophrenia. | ZHANG Xuejun WANG Longqiang DING Yuhan HUANG Liya CHENG Xiefeng | 2019 | Chinese Journal of Electronics2019，28，3： | 3 |
| 5 | Methanol synthesis from CO 2 -rich syngas over a ZrO 2 doped CuZnO catalyst显示文摘 | Cheng Yang Zhongyi Ma Ning Zhao Wei Wei Tiandou Hu Yuhan Sun | 2006 | Catalysis Today2006，，1： | 1 |
| 6 | LATS1 K751 acetylation blocks activation of Hippo signalling and switches LATS1 from a tumor suppressor to an oncoprotein显示文摘Large tumor suppressor 1(LATS1)is the key kinase controlling activation of Hippo signalling pathway.Post-translational modifications of LATS1 modulate its kinase activity.However,detailed mechanism underlying LATS1 stability and activation remains elusive.Here we report that LATS1 is acetylated by acetyltransferase CBP at K751 and is deacetylated by deacetylases SIRT3 and SIRT4.Acetylation at K751 stabilized LATS1 by decreasing LATS1 ubiquitination and inhibited LATS1 activation by reducing its phosphorylation.Mechanistically,LATS1 acetylation resulted in inhibition of YAP phosphorylation and degradation,leading to increased YAP nucleus translocation and promoted target gene expression.Functionally,LATS1-K751 Q,the acetylation mimic mutant potentiated lung cancer cell migration,invasion and tumor growth,whereas LATS1-K751 R,the acetylation deficient mutant inhibited these functions.Taken together,we demonstrated a previously unidentified post-translational modification of LATS1 that converts LATS1 from a tumor suppressor to a tumor promoter by suppression of Hippo signalling through acetylation of LATS1. | Siyuan Yang Weizhi Xu Cheng Liu Jiaqi Jin Xueying Li Yuhan Jiang Lei Zhang Xianbin Meng Jun Zhan Hongquan Zhang | 2022 | Science China(Life Sciences)2022，65，1： | 1 |
| 7 | Green experi- ment and green network 显示文摘 | Cheng Yuhan Zhang Shaobai Cheng Jianbin | 2013 | Applied Mechanics and Materi- als2013，94，4： | 1 |
| 8 | Anthropogenic monoterpenes aggravating ozone pollution显示文摘Monoterpenes have been known to have a critical influence on air quality and climate change through their impact on the formation of fine particles.Here we present field evidence that monoterpene oxidations largely enhanced local ozone production in a regional site in eastern China.The observed monoterpene was most likely from biomass burning rather than biogenic emissions,as indicated by the high correlation with CO at night-time,and the observed ratio of these two species was consistent with previously determined values from biomass burning experiments.Fast monoterpene oxidations were determined experimentally based on direct radical measurements,leading to a daily ozone enhancement of 4-18 parts per billion by volume(ppb),which was 6%-16%of the total ozone production,depending on the speciation of monoterpenes.It demonstrates that the previously overlo oked anthropogenic monoterpenes make an important contribution to 0_(3) production in eastern China.The role could possibly be important at similar locations across China and other parts of the world that are characterized by massive emissions,especially where there are high NO_(x) levels.Our results highlight that anthropogenic monoterpenes should be taken into account when proceeding with the coordinated mitigation of O_(3) and particulate matter pollution. | Haichao Wang Xuefei Ma Zhaofeng Tan Hongli Wang Xiaorui Chen Shiyi Chen Yaqin Gao Ying Liu Yuhan Liu Xinping Yang Bin Yuan Limin Zeng Cheng Huang Keding Lu Yuanhang Zhang | 2022 | National Science Review2022，9，9： | 1 |
| 9 | Sedimentary characteristics and depositional evolution of carbonate platform during the Cambrian and Ordovician in eastern Tarim Basin,NW China显示文摘The eastern Tarim Basin(Tadong Area)has gained wide attentions on large-scale marine carbonate reservoirs in Cambrian-Ordovician due to significant hydrocarbon discoveries.A systematic analysis combining thin sections,cores,wireline logs,and seismic data is conducted on Cambrian-Ordovician carbonate platform in the whole eastern Tarim Basin,including Gucheng area,Majiaer area,and western Luobopo rise(Luoxi area).The results show that 8 sub-facies and more than 10 microfacies are developed including open platform,restricted/semi-restricted platform,reef-shoal around platform margin,drowned platform,foreslope,neritic platform,and deep-water basin.As both key areas for hosting petroleum reserves during the Cambrian and Ordovician,the Luoxi area is dominated by deep-water basin facies,while the Gucheng area is dominated by neritic platform facies and deep-water basin facies during the Lower Cambrian.The deposition evolution during the whole Cambrian is dominated by slope facies and deep-water facies,platform margin facies,and platform facies.In contrast,it is dominated by open platform facies during the whole Ordovician.The depositional evolution of carbonate platform is mainly controlled by paleo-geomorphology and sea-level changes.The distribution of paleo-geomorphologic units plays an important role in controlling types and distributions of carbonate platform facies.The transgression assists in growth of reef-shoal complex and lime mud mound in the Early Ordovician.However,with neritic platform and slope being to disappeared,in the Middle Ordovician,platform margin facies are well developed in Gucheng Area.Platform facies and deepwater basin facies are widely distributed.Finally,carbonate platform is drowned due to sea level rising in the Late Ordovician.The depositional evolution of carbonate platform coinciding falling and rising of sea-level changes can be beneficial for appropriate carbonate reservoirs identification and petroleum exploration. | Jingyan LIU Shiqiang XIA Junlong ZHANG Feng HE Yuhan CHENG Yi ZHU Zhaoqin CHEN Huoxiang DONG | 2023 | Frontiers of Earth Science2023，17，2： | 0 |
| 10 | Ungulate bocaparvovirus 4 and rodent bocavirus are different genotypes of the same species of virus显示文摘Bocaviruses are associated with many human infectious diseases, such as respiratory tract infections, gastroenteritis, and hepatitis. Rats are known to be reservoirs of bocaviruses, including rodent bocavirus and rat bocavirus.Recently, ungulate bocaparvovirus 4, a known porcine bocavirus, has also been found in rats. Thus, investigating bocaviruses in rats is important for determining the origin of the viruses and preventing and controlling their transmission. To the best of our knowledge, no study to date has investigated bocaviruses in the livers of rats. In this report, a total of 624 rats were trapped in southern China between 2014 and 2017. Liver and serum samples from rats were tested for the prevalence of bocaviruses using PCR. Sequences related to ungulate bocaparvovirus 4and rodent bocavirus were detected in both liver and serum samples. Interestingly, the prevalence of ungulate bocaparvovirus 4(reference strain: KJ622366.1) was higher than that of rodent bocavirus(reference strain:KY927868.1) in both liver(2.24% and 0.64%, respectively) and serum samples(2.19% and 0.44%, respectively).The NS1 regions of ungulate bocaparvovirus 4 and rodent bocavirus related sequences displayed over 84% and88% identity at the nucleic acid and amino acid levels, respectively. Furthermore, these sequences had similar genomic structure, genomic features, and codon usage bias, and shared a common ancestor. These viruses also displayed greater adaptability to rats than pigs. Our results suggested that ungulate bocaparvovirus 4 and rodent bocavirus may originate from rats and may be different genotypes of the same bocavirus species. | Wenqiao He Yuhan Gao Yuqi Wen Xuemei Ke Zejin Ou Jiaqi Fu Mingji Cheng Yun Mo Qing Chen | 2022 | Virologica Sinica2022，37，2： | 0 |
| 11 | 2018年在线离子源运行报告显示文摘HIRFL accelerator facility has been operated with two ion sources as its pre-injectors,which are LECR3 and SECRAL-II.In 2018,there were 19 kinds of ion beams delivered successfully,and the service time of the two sources are 4594.5 and 2231 h respectively,amounting to 6825.5 h in total,in which SECRAL and LECR3 provided 4 and 1 kinds of metallic ion beams respectively,and the total service time for the metallic ones is 2322 h,accounting for 34%of the total service time.Table 1 summarizes the main information about the ion beams delivered by the two ion sources. | Feng Yucheng Zhang Wenhui Ma Hongyi Fang Xing Guo Junwei Huang Wei Jia Zehua Jin Qianyu Li Jiaqing Li Jibo Li Libin Li Lixuan Lu Yuting Qian Cheng Shen Zhen Wang Guicai Wang Hui Yang Yao Zhai Yuhan Zhang Junjie Zhang Sheng Zhang Xuezhen Sun Liangting | 2018 | IMP & HIRFL Annual Report2018，，1： | 0 |
| 12 | All-optical PtSe2 silicon photonic modulator with ultra-high stability显示文摘All-optical modulation based on the photothermal effect of two-dimensional(2 D)materials shows great promise for all-optical signal processing and communication.In this work,an all-optical modulator with a 2 D Pt Se2-onsilicon structure based on a microring resonator is proposed and demonstrated utilizing the photothermal effect of Pt Se2.A tuning efficiency of 0.0040 nm·m W-1 is achieved,and the 10%–90%rise and decay times are 304μs and 284μs,respectively.The fabricated device exhibits a long-term air stability of more than 3 months.The experimental results prove that 2 D Pt Se2 has great potential for optical modulation on a silicon photonic platform. | Kangkang Wei Delong Li Zhitao Lin Zhao Cheng Yuhan Yao Jia Guo Yunzheng Wang Yupeng Zhang Jianji Dong Han Zhang Xinliang Zhang | 2020 | Photonics Research2020，8，7： | 0 |
| 13 | Improved Density Peaking Algorithm for Community Detection Based on Graph Representation Learning显示文摘There is a large amount of information in the network data that we canexploit. It is difficult for classical community detection algorithms to handle network data with sparse topology. Representation learning of network data is usually paired with clustering algorithms to solve the community detection problem.Meanwhile, there is always an unpredictable distribution of class clusters outputby graph representation learning. Therefore, we propose an improved densitypeak clustering algorithm (ILDPC) for the community detection problem, whichimproves the local density mechanism in the original algorithm and can betteraccommodate class clusters of different shapes. And we study the communitydetection in network data. The algorithm is paired with the benchmark modelGraph sample and aggregate (GraphSAGE) to show the adaptability of ILDPCfor community detection. The plotted decision diagram shows that the ILDPCalgorithm is more discriminative in selecting density peak points compared tothe original algorithm. Finally, the performance of K-means and other clusteringalgorithms on this benchmark model is compared, and the algorithm is proved tobe more suitable for community detection in sparse networks with the benchmarkmodel on the evaluation criterion F1-score. The sensitivity of the parameters ofthe ILDPC algorithm to the low-dimensional vector set output by the benchmarkmodel GraphSAGE is also analyzed. | Jiaming Wang Xiaolan Xie Xiaochun Cheng Yuhan Wang | 2022 | Computer Systems Science & Engineering2022，43，12： | 0 |
| 14 | Structure and Properties of Sol-Gel Derived CuNiMnZrO2 Catalysts for CO Hydrogenation显示文摘Two CuNiMnZrO2 catalysts (crystallized or non-crystallized) were prepared by co-hydrolyzing zirconium n-propoxide with Cu(NO3)2, Mn(NO3)2 and Ni(NO3)2 in an ethanol solution in the presence of diglycol. The physical and chemical properties of the catalysts were characterized using BET, XRD,TEM, XPS and CO-DRIFT techniques. It was found that the non-crystallized CuNiMnZrO2 catalyst demonstrated highly dispersed active phases and high activity for CO adsorption, which resulted in good performance for synthesis of higher alcohols in CO hydrogenation compared to crystallized CuNiMnZrO2. | Zhongyi Ma, Cheng Yang, Run Xu. Wei Wei, Wenhuai Li, Yuhan SunState Key Laboratory of Coal Conversion, Institute uf Coal Chemistry, Chinese Academy of Sciences, Taiyuan 030001, China | 2003 | Journal of Natural Gas Chemistry2003，12，2： | 0 |
| 15 | De novo assembly of plant complete genomes显示文摘Plant genomes encode the mysteries of how plants cope with complex environments over long evolutionary histories.Over the past 20 years,rapidly developing technologies have allowed the decoding of hundreds of plant draft or reference genomes.The diversity,polyploidy and heterozygosity of plants make it technically challenging and time-consuming to generate high-quality plant genome assemblies.Recently invented ultra-long read sequencing technologies have achieved a milestone where several plant genomes have been gapless and assembled into telomere to telomere.Telomere-to-telomere(T2T)genome refers to a high-quality complete genome with high genomic accuracy,high continuity,and high integrity.With the release of the completed human genome and Arabidopsis thaliana genome,the era of complete T2T species genome has arrived.In this review,we summarize the history leading up to the gap free plant genomes based on emerging ultra-long read sequencing technologies.We discuss to close gaps relying on targeted genome sequencing and assembling technologies.However,there are still quite a lot of challenges in super large,polyploidy,and unstable genomes.Nevertheless,these complete genomes have already provided unprecedented information,which will certainly deepen our understanding of plant genomes and the exploration of more functional sequences.By taking advantage of the complete genomes,a series of important genes could be annotated,which will help achieve the goal of genome design in crop species. | Yuhan Zhou Ji Zhang Xianghui Xiong Zong-Ming Cheng Fei Chen | 2022 | Tropical Plants2022，1，1： | 0 |
| 16 | Operational Report of On-line Ion Sources in 2019显示文摘In 2019,the service time of the two on-line ion sources,LECR3 and SECRAL,is 3642.5 and 3617 h respectively,amounting to 7259.5 h.There are 19 kinds of ion beams delivered to the accelerator successfully. | Feng Yucheng Zhang Wenhui Ma Hongyi Ma Jindou Fang Xing Guo Junwei Jia Zehua Jin Qianyu Li Jiaqing Li Jibo Li Libin Li Lixuan Lu Yuting Qian Cheng Shen Zhen Wang Guicai Wang Hui Yang Yao Zhai Yuhan Zhang Junjie Zhang Xuezhen Sun Liangting | 2019 | IMP & HIRFL Annual Report2019，，1： | 0 |
| 17 | Identification and evaluation of fault-fracture reservoirs in buried hills of the Lower Paleozoic, Chengdao area, China显示文摘The Bohai Bay Basin is a Meso-Cenozoic rifted basin where the Paleozoic buried hills with great hydrocarbon potentials are well developed. The reservoir space types are complex and diverse due to tectonic activities, making fracture distribution highly heterogeneous. Reservoir identification and mapping is challenging due to their large burial depth and poor resolution of seismic data. An integration of well-logging, seismic data interpretation and core observation is applied to identify three structural unit types in the study area, that is, fault breccia zone, fault cataclastic zone, and fault massive rock zone. A comprehensive well-logging identification template and a comprehensive discriminant function M for the reservoir are established based on the well-logging response characteristics. A M value greater than 0.12 indicates a fault breccia zone, that between 0.04 and 0.12 marks a fault cataclastic zone, and that in the range from 0.02 to 0.04 represents a fault massive rock zone. A seismic prediction method with multi-parameter fusion is proposed in the study. The large-scale fractures are mapped by coherence-clutter parameters, while small fractures are predicted via waveform indication inversion. The spatial distribution of “fault-fracture reservoirs” is precisely mapped by frequency fusion technology. It is found that the fault breccia zones usually occur close to the fault planes, while the fault cataclastic zones are slightly away from the fault planes. The hydrocarbon abundance of the breccia zones is greater than that of the fault cataclastic and fault massive rock zones. | Zhiwei Wang Kai Zhang Yuhan Cheng Qunhu Wu | 2023 | Energy Geoscience2023，4，3： | 0 |
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