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| 1 | 得与失:苦苣苔科新的属级界定与分类系统——中国该科植物之变迁(英文)显示文摘过去20年对苦苣苔科植物的分子系统学研究已经极大地拓展了对这个科的种间关系与属一级之界定的理解。该文提供了一个苦苣苔科植物新分类系统,与传统的经典形态学分类系统比较,这一新系统被认为能更好地反映科下分类单元彼此之间的自然关系。众多传统意义上的属被分割、合并或者重新定义,这些巨大的分类变动正在影响着中国的苦苣苔科植物系统分类。此外,基于最近采集的材料,一些新属得以建立,一方面说明在中国还有相当多的野外工作需要做;而另一方面则再次证明了中国的苦苣苔科植物多样性是如此之丰富。在此,针对目前已经完成的工作和分类结论,对中国苦苣苔科植物的新分类系统进行了总结与概述,并深入地讨论了部分传统分类学上存在困惑的疑难属。 | MOLLER Michael 韦毅刚 温放 CLARK John L. WEBER Anton | 2016 | 广西植物2016，36，1： | 35 |
| 2 | Irritable bowel syndrome: A microbiome-gut-brain axis disorder?显示文摘Irritable bowel syndrome(IBS) is an extremely prevalent but poorly understood gastrointestinal disorder. Consequently, there are no clear diagnostic markers to help diagnose the disorder and treatment options are limited to management of the symptoms. The concept of a dysregulated gut-brain axis has been adopted as a suitable model for the disorder. The gut microbiome may play an important role in the onset and exacerbation of symptoms in the disorder and has been extensively studied in this context. Although a causal role cannot yet be inferred from the clinical studies which have attempted to characterise the gut microbiota in IBS, they do confirm alterations in both community stability and diversity. Moreover, it has been reliably demonstrated that manipulation of the microbiota can influence the key symptoms, including abdominal pain and bowel habit, and other prominent features of IBS. A variety of strategies have been taken to study these interactions, including probiotics, antibiotics, faecal transplantations and the use of germ-free animals. There are clear mechanisms through which the microbiota can produce these effects, both humoral and neural. Taken together, these findings firmly establish the microbiota as a critical node in the gut-brain axis and one which is amenable to therapeutic interventions. | Paul J Kennedy John F Cryan Timothy G Dinan Gerard Clarke | 2014 | World Journal of Gastroenterology2014，20，39： | 20 |
| 3 | 测船处瞬时潮位的GPS精密确定显示文摘利用GPS载波相位差分测量技术,借助时间偏差改正、姿态改正、高程转换、信号处理和吃水改正,获得了测船处精密在航潮位。该方法已在几个GPS在航潮位测量实验中得到了验证,并取得了理想的结果。 | 赵建虎 张红梅 John E.Hughes Clarke | 2006 | 武汉大学学报(信息科学版)2006，31，12： | 15 |
| 4 | 局部无缝垂直参考基准面的建立方法研究显示文摘为在局域建立一个无缝垂直参考基准面,提出了两步转换的思想和方法,即从大地高到正高然后到海图高。利用该方法,构造了Saint John河高程转换模型,并在该河段建立了无缝垂直参考基准面,且得到了实际验证。 | 赵建虎 张红梅 John E Hughes Clarke | 2006 | 武汉大学学报(信息科学版)2006，31，5： | 12 |
| 5 | Unique,Persistent,Resolvable:Identifiers as the Foundation of FAIR显示文摘The FAIR principles describe characteristics intended to support access to and reuse of digital artifacts in the scientific research ecosystem.Persistent,globally unique identifiers,resolvable on the Web,and associated with a set of additional descriptive metadata,are foundational to FAIR data.Here we describe some basic principles and exemplars for their design,use and orchestration with other system elements to achieve FAIRness for digital research objects. | Nick Juty Sarala M.Wimalaratne Stian Soiland-Reyes John Kunze Carole A.Goble Tim Clark | 2020 | Data Intelligence2020，2，1： | 11 |
| 6 | National trends in resection of the distal pancreas显示文摘AIM:To investigate national trends in distal pancreatectomy(DP) through query of three national patient care databases.METHODS:From the Nationwide Inpatient Sample(NIS,2003-2009),the National Surgical Quality Improvement Project(NSQIP,2005-2010),and the Surveillance Epidemiology and End Results(SEER,2003-2009) databases using appropriate diagnostic and procedural codes we identified all patients with a diagnosis of a benign or malignant lesion of the body and/or tail of the pancreas that had undergone a partial or distal pancreatectomy.Utilization of laparoscopy was defined in NIS by the International Classification of Diseases,Ninth Revision correspondent procedure code;and in NSQIP by the exploratory laparoscopy or unlisted procedure current procedural terminology codes.In SEER,patients were identified by the International Classification of Diseases for Oncology,Third Edition diagnosis codes and the SEER Program Code Manual,third edition procedure codes.We analyzed the databases with respect to trends of inpatient outcome metrics,oncologic outcomes,and hospital volumes in patients with lesions of the neck and body of the pancreas that underwent operative resection.RESULTS:NIS,NSQIP and SEER identified 4242,2681 and 11 082 DP resections,respectively.Overall,laparoscopy was utilized in 15%(NIS) and 27%(NSQIP).No significant increase was seen over the course of the study.Resection was performed for malignancy in 59%(NIS) and 66%(NSQIP).Neither patient Body mass index nor comorbidities were associated with operative approach(P = 0.95 and P = 0.96,respectively).Mortality(3% vs 2%,P = 0.05) and reoperation(4% vs 4%,P = 1.0) was not different between laparoscopy and open groups.Overall complications(10% vs 15%,P < 0.001),hospital costs [44 741 dollars,interquartile range(IQR) 28 347-74 114 dollars vs 49 792 dollars,IQR 13 299-73 463,P = 0.02] and hospital length of stay(7 d,IQR 4-11 d vs 7 d,IQR 6-10,P < 0.001) were less when laparoscopy was utilized.One and two year survival after resection for malignancy were unchanged over the course of the study(ductal adenocarinoma 1-year 63.6% and 2-year 35.1%,P = 0.53;intraductal papillary mucinous neoplasm and nueroendocrine 1-year 90% and 2-year 84%,P = 0.25).The majority of resections were performed in teaching hospitals(77% NIS and 85% NSQIP),but minimally invasive surgery(MIS) was not more likely to be used in teaching hospitals(15% vs 14%,P = 0.26).Hospitals in the top decile for volume were more likely to be teaching hospitals than lower volume deciles(88% vs 43%,P < 0.001),but were no more likely to utilize MIS at resection.Complication rate in teaching and the top decile hospitals was not significantly decreased when compared to non-teaching(15% vs 14%,P = 0.72) and lower volume hospitals(14% vs 15%,P = 0.99).No difference was seen in the median number of lymph nodes and lymph node ratio in N1 disease when compared by year(P = 0.17 and P = 0.96,respectively).CONCLUSION:There appears to be an overall underutilization of laparoscopy for DP.Centralization does not appear to be occurring.Survival and lymph node harvest have not changed. | Armando Rosales-Velderrain Steven P Bowers Ross F Goldberg Tatyan M Clarke Mauricia A Buchanan John A Stauffer Horacio J Asbun | 2012 | World Journal of Gastroenterology2012，18，32： | 8 |
| 7 | Evaluation of biomarker panels for early stage ovarian cancer detection and monitoring for disease recurrence显示文摘 | Laura J. Havrilesky Clark M. Whitehead Jennifer M. Rubatt Robert L. Cheek John Groelke Qin He Douglas P. Malinowski Timothy J. Fischer Andrew Berchuck | 2008 | Gynecologic Oncology2008，，3： | 7 |
| 8 | Determination of Precise Instantaneous Height at Multibeam Transducer显示文摘克服缺点传统多微笑调查并且数据处理,一个新方法为即时高度的精确决心被介绍在多,由 GPS 高度和举的混合的横梁变换器发信号。信号需要被态度修正首先改正到变换器中心的 Beforesignal 混合, GPS 高度和举。第二, GPS 高度需要被举支票和修正本身检查并且修改。黄油价值和快速傅里叶变换(快 Fourier 转变) 在信号混合被使用。最后,快速傅里叶变换被认为在信号处理适当。新方法高效地克服传统的方法的缺点,并且这是由 MBS 的证明的井(多微笑深测术的系统) 实验。 | ZHAO Jianhu ZHANG Hongmei John E. Hughes Clarke | 2007 | Geo-Spatial Information Science2007，10，4： | 6 |
| 9 | Endoscopic balloon catheter dilatation via retrograde or static technique is safe and effective for cricopharyngeal dysfunction显示文摘AIM To evaluate the safety and efficacy of upper esophageal sphincter(UES) dilatation for cricopharyngeal(CP) dysfunction. To determine if:(1) indication for dilatation; or(2) technique of dilatation correlated with symptom improvement.METHODS All balloon dilatations performed at our institution from over a 3-year period were retrospectively analyzed for demographics, indication and dilatation site. All dilatations involving the UES underwent further review to determine efficacy, complications, and factors that predict success. Dilatation technique was separated into static(stationary balloon distention) and retrograde(brusque pull-back of a fully distended balloon across the UES).RESULTS Four hundred and eighty-eight dilatations were reviewed. Thirty-one patients were identified who underwent UES dilatation. Median age was 63 years(range 27-81)and 55% of patients were male. Indications included dysphagia(28 patients), globus sensation with evidence of UES dysfunction(2 patients) and obstruction to echocardiography probe with cricopharyngeal(CP)bar(1 patient). There was evidence of concurrent oropharyngeal dysfunction in 16 patients(52%) and a small Zenker's diverticula(≤ 2 cm) in 7 patients(23%). Dilator size ranged from 15 mm to 20 mm. Of the 31 patients, 11 had dilatation of other esophageal segments concurrently with UES dilatation and 20 had UES dilatation alone.Follow-up was available for 24 patients for a median of 2.5 mo(interquartile range 1-10 mo), of whom 19 reported symptomatic improvement(79%). For patients undergoing UES dilatation alone, follow-up was available for 15 patients, 12 of whom reported improvement(80%).Nineteen patients underwent retrograde dilatation(84%response) while 5 patients had static dilatation(60%response); however, there was no significant difference in symptom improvement between the techniques(P = 0.5).Successful symptom resolution was also not significantly affected by dilator size, oropharyngeal dysfunction,Zenker's diverticulum, age or gender(P > 0.05). The only complication noted was uvular edema and a shallow ulcer after static dilatation in one patient, which resolved spontaneously and did not require hospital admission.CONCLUSION UES dilatation with a through-the-scope balloon by either static or retrograde technique is safe and effective for the treatment of dysphagia due to CP dysfunction. To our knowledge, this is the first study evaluating retrograde balloon dilatation of the UES. | Vinay Chandrasekhara Joyce Koh Lakshmi Lattimer Kerry B Dunbar William J Ravich John O Clarke | 2017 | World Journal of Gastrointestinal Endoscopy2017，9，4： | 6 |
| 10 | Mapping and Assessing Typhoon-induced Forest Disturbance in Changbai Mountain National Nature Reserve Using Time Series Landsat Imagery显示文摘Monitoring forest disturbances is important for understanding changes in ecosystems. The 1986 Typhoon Vera was a serious disturbance that severely impacted the forest ecosystems of Changbai Mountain National Nature Reserve. Although the typhoon disturbance occurred more than two decades ago, the effects of the typhoon still remain within the study area. Few studies have focused on mapping and assessing disturbances across broad spatial and temporal scales. For this study, we first generated a map of forest composition prior to the typhoon disturbance, which served as a baseline data for the extraction of disturbed area. Then, the Disturbance Index(DI) method was tested for mapping the extent and magnitude of disturbance in the study area by applying a Tasseled Cap transformation to the Landsat imagery. The Landsatbased DI method estimated that an area of 13,764.78 ha of forest was disturbed by the typhoon. Based on visual assessments, these results correspond closely with the reference map derived from ground surveys. These results also revealed the influence of local topographic features on the distribution of windthrow areas. Windthrow areas were more pronounced inareas with elevations ranging from 1,000 to 2,000 m, slopes of less than 10 degrees, and southwestern to northwestern aspects. In addition, the relatively long(25 years) post-typhoon recovery period assessed by this study provided a more comprehensive analysis of the dynamics of forest recovery processes over time. Windthrow areas did not recover immediately after the typhoon, likely due to forest management practices enacted at the time. So far, forest recovery has proceeded more rapidly at elevations below 1,400 m, particularly on western slopes within the study area. Finally, a time series of DI values within the study period suggests a secondary disturbance may have occurred between 2000 and 2001. | GUO Xiao-yi ZHANG Hong-yan WANG Ye-qiao John Clark | 2015 | Journal of Mountain Science2015，12，2： | 5 |
| 11 | Upper esophageal sphincter abnormalities are strongly predictive of treatment response in patients with achalasia显示文摘AIM: To investigate the relationship between upper esophageal sphincter abnormalities achalasia treatment METHODS: We performed a retrospective study of 41 consecutive patients referred for high resolution esophageal manometry with a final manometric diagnosis of achalasia. Patients were sub-divided by presence or absence of Upper esophageal sphincter(UES) abnormality, and clinical and manometric profiles were compared.Correlation between UES abnormality and sub-type(i.e.,hypertensive, hypotensive or impaired relaxation) and a number of variables, including qualitative treatment response, achalasia sub-type, co-morbid medical illness,psychiatric illness, surgical history, dominant presentingsymptom, treatment type, age and gender were also evaluated.RESULTS: Among all 41 patients, 24(58.54%) had a UES abnormality present. There were no significant differences between the groups in terms of age, gender or any other clinical or demographic profiles. Among those with UES abnormalities, the majority were either hypertensive(41.67%) or had impaired relaxation(37.5%) as compared to hypotensive(20.83%), although this did not reach statistical significance(P = 0.42). There was no specific association between treatment response and treatment type received; however, there was a significant association between UES abnormalities and treatment response. In patients with achalasia and concomitant UES abnormalities, 87.5% had poor treatment response, while only 12.5% had favorable response. In contrast, in patients with achalasia and no UES abnormalities, the majority(78.57%) had good treatment response, as compared to 21.43% with poor treatment response(P = 0.0001). After controlling for achalasia sub-type, those with UES abnormality had 26 times greater odds of poor treatment response than those with no UES abnormality(P = 0.009). Similarly, after controlling for treatment type, those with UES abnormality had 13.9 times greater odds of poor treatment response compared to those with no UES abnormality(P = 0.017).CONCLUSION: The presence of UES abnormalities in patients with achalasia significantly predicted poorer treatment response as compared to those with normal UES function. | Simon C Mathews Maria Ciarleglio Yamile Haito Chavez John O Clarke Ellen Stein Bani Chander Roland | 2014 | World Journal of Clinical Cases2014，2，9： | 5 |
| 12 | Pushing the boundaries of diode-pumped solid-state lasers for high-energy applications显示文摘We report on the successful demonstration of a 150 J nanosecond pulsed cryogenic gas cooled,diode-pumped multi-slab Yb:YAG laser operating at 1 Hz.To the best of our knowledge,this is the highest energy ever recorded for a diodepumped laser system. | Saumyabrata Banerjee Paul Mason Jonathan Phillips Jodie Smith Thomas Butcher Jacob Spear Mariastefania De Vido Gary Quinn Danielle Clarke Klaus Ertel Cristina Hernez-Gomez Chris Edwards John Collier | 2020 | High Power Laser Science and Engineering2020，8，2： | 4 |
| 13 | Genetic Risk Factors for Post-Infectious Irritable Bowel Syndrome Following a Waterborne Outbreak of Gastroenteritis显示文摘 | Alexandra–Chloé Villani Mathieu Lemire Marroon Thabane Alexandre Belisle Geneviève Geneau Amit X. Garg William F. Clark Paul Moayyedi Stephen M. Collins Denis Franchimont John K. Marshall | 2010 | Gastroenterology2010，，4： | 4 |
| 14 | Gastric per-oral endoscopic myotomy: Current status and future directions显示文摘Gastroparesis, or symptomatic delayed gastric emptying in the absence of mechanical obstruction, is a challenging and increasingly identified syndrome. Medical options are limited and the only medication approved by the Food and Drug Administration for treatment of gastroparesis is metoclopramide, although other agents are frequently used off label. With this caveat, first-line treatments for gastroparesis include dietary modifications, antiemetics and promotility agents, although these therapies are limited by suboptimal efficacy and significant medication side effects. Treatment of patients that fail first-line treatments represents a significant therapeutic challenge. Recent advances in endoscopic techniques have led to the development of a promising novel endoscopic therapy for gastroparesis via endoscopic pyloromyotomy, also referred to as gastric per-oral endoscopic myotomy or per-oral endoscopic pyloromyotomy. The aim of this article is to review the technical aspects of the per-oral endoscopic myotomy procedure for the treatment of gastroparesis, provide an overview of the currently published literature, and outline potential next directions for the field. | Alexander Podboy Joo Ha Hwang Linda A Nguyen Patricia Garcia Thomas A Zikos Afrin Kamal George Triadafilopoulos John O Clarke | 2019 | World Journal of Gastroenterology2019，25，21： | 3 |
| 15 | Gut memories: Towards a cognitive neurobiology of irritable bowel syndrome显示文摘 | Paul J. Kennedy Gerard Clarke Eamonn M.M. Quigley John A. Groeger Timothy G. Dinan John F. Cryan | 2011 | Neuroscience and Biobehavioral Reviews2011，，1： | 2 |
| 16 | 多波束测量中换能器瞬时精密高程的确定显示文摘分析了GPS高程信号和Heave信号的频段特征,利用数字信号处理技术,提取了GPS高程和Heave中的有效频段信号,合成了一个全新的信号。该合成信号能够全面反映多波束换能器的实际垂直运动,并能够克服传统多波束测量和数据处理方法的缺陷,大大提高了多波束在垂直方向的成果精度。实验证明了该方法的正确性和可行性。 | 赵建虎 张红梅 John E Hughes Clarke 王胜平 | 2006 | 武汉大学学报(信息科学版)2006，31，11： | 2 |
| 17 | Activity of Crizotinib (PF02341066), a Dual Mesenchymal-Epithelial Transition (MET) and Anaplastic Lymphoma Kinase (ALK) Inhibitor, in a Non-small Cell Lung Cancer Patient with De Novo MET Amplification显示文摘 | Sai-Hong Ignatius Ou Eunice L. Kwak Christina Siwak-Tapp Joni Dy Kristin Bergethon Jeffrey W. Clark D. Ross Camidge Benjamin J. Solomon Robert G. Maki Yung-Jue Bang Dong-Wan Kim James Christensen Weiwei Tan Keith D. Wilner Ravi Salgia A. John Iafrate | 2011 | Journal of Thoracic Oncology2011，，5： | 2 |
| 18 | Estimation of tropical forest structural characteristics using large-footprint lidar显示文摘 | Jason B Drake Ralph O Dubayah David B Clark Robert G Knox J.Bryan Blair Michelle A Hofton Robin L Chazdon John F Weishampel Steve Prince | 2001 | Remote Sensing of Environment2001，，2： | 1 |
| 19 | Cause-related sponsorship: A survey of consumer/ spectator beliefs attitudes behavioral intentions and corporate image impressions 显示文摘 | Lachowetz Tony Clark John Irw Richard Cornwell T Bettina | 2002 | American Marketing Association Conference Proceedings2002，13，： | 1 |
| 20 | Automated Program Flaw Finding Using Simulated Annealing显示文摘 | John Clark Keith Mander | 1998 | ASM SIGSOFT Software Engineering Notes1998，23，2： | 1 |
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