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| 1 | Phylotranscriptomics in Cucurbitaceae Reveal Multiple Whole-Genome Duplications and Key Morphological and Molecular Innovations显示文摘The ability of climbing plants to grow upward along others to reach the canopy for photosynthesis is hypothesized as a key innovation in flowering plants.Most members of the Cucurbitaceae,a family containing^1000 species and many important crops,are climbers and have characteristic tendrils and pepo fruits.Here,we present 127 newly sequenced transcdptomes and genomes along with other datasets for a total of 136 cucurbits representing all tribes to establish a robust Cucurbitaceae phylogeny containing eight highly resolved major clades.We analyzed whole-genome duplication,diversification dynamics,and ancestral morphologies,and found that after early genome duplication event(s),a burst of diversification and morphological innovations in flower,fruit,and root characters occurred under the climate optimum in the Early Eocene.Species radiation during the Mid-Eocene Climatic Optimum also coincided with several morphological changes shared by 80%of cucurbits.We found that the cucurbit-specific tendril identity gene TEN originated from a paleo-polyploidization event at the origin of the family.Our results support the hypothesis that cucurbit diversifications were probably driven by increased genetic diversity following polyploidizations and by trait morphological innovations under paleo-climate upheavals.Our study provides a phylogenetic framework and new insights into morphological and genomic changes underlying the adaptive evolution of Cucurbitaceae. | Jing Guo Weibin Xu Yi Hu Jie Huang Yiyong Zhao Lin Zhang Chien-Hsun Huang Hong Ma | 2020 | Molecular Plant2020，13，8： | 7 |
| 2 | First results on ^(76)Ge neutrinoless double beta decay from CDEX-1 experiment显示文摘We report the first results on ^(76)Ge neutrinoless double beta decay from stage one of the China dark-matter experiment(CDEX).A p-type point-contact high-purity germanium detector with a mass of 994 g has been installed to detect neutrinoless double beta decay events, as well as to directly detect dark matter particles. An exposure of 304 kg d has been analyzed over a wide spectral band from 500 keV to 3 MeV. The average event rate obtained was about 0.012 counts per keV per kg per day over the 2.039 MeV energy range. The half-life of ^(76)Ge neutrinoless double beta decay derived based on this result is T^(0ν)1/2>6.4×10^(22) yr(90% C.L.). An upper limit on the effective Majorana-neutrino mass of 5.0 eV has been achieved. | Li Wang Qian Yue KeJun Kang JianPing Cheng YuanJing Li TszKing Henry Wong ShinTed Lin JianPing Chang JingHan Chen QingHao Chen YunHua Chen Zhi Deng Qiang Du Hui Gong Li He QingJu He JinWei Hu HanXiong Huang TengRui Huang LiPing Jia Hao Jiang HauBin Li Hong Li JianMin Li Jin Li Jun Li Xia Li XueQian Li YuLan Li FongKay Lin ShuKui Liu Hao Ma JingLu Ma XingYu Pan Jie Ren XiChao Ruan ManBin Shen Vivek Sharma Lakhwinder Singh Manoj Kumar Singh Manoj Kumar Singh Arun Kumar Soma ChangJian Tang WeiYou Tang ChaoHsiung Tseng JiMin Wang Qing Wang ShiYong Wu YuCheng Wu HaoYang Xing Yin Xu Tao Xue LiTao Yang SongWei Yang Nan Yi ChunXu Yu HaiJun Yu WeiHe Zeng XiongHui Zeng Zhi Zeng Lan Zhang YunHua Zhang MingGang Zhao Wei Zhao JiFang Zhou ZuYing Zhou JingJun Zhu WeiBin Zhu ZhongHua Zhu | 2017 | Science China(Physics,Mechanics & Astronomy)2017，60，7： | 3 |
| 3 | Enantioselective catalysis with homochiral metalorganic frameworks显示文摘 | MA Liqing ABNEY C LIN Weibin | 2009 | Chem Soc Rev2009，38，： | 1 |
| 4 | Preparation of Y/MCM-41 composite materials显示文摘 | Li Ruifeng Fan Weibin Ma Jianming | 2000 | Stud Surf Sci Catal2000，129，： | 1 |
| 5 | Crystallization mechanism study on ZSM-48 in the system Na2O-Al2O3-SiO2- H2N(CH2)6NH2显示文摘 | Fan Weibin Li Ruifeng Ma Jinghong | 1997 | Microporous Materials1997，8，34： | 1 |
| 6 | New insights into the structural basis of DNA recognition by HINa and HINb domains of IFI16显示文摘Interferon gamma-inducible protein 16(IFI16)senses DNA in the cytoplasm and the nucleus by using two tandem hematopoietic interferon-inducible nuclear(HIN)domains,HINa and HINb,through the cooperative assembly of IFI16 filaments on double-stranded DNA(dsDNA).The role of HINa in sensing DNA is not clearly understood.Here,we describe the crystal structure of the HINa domain in complex with DNA at 2.55A°resolution and provide the first insight into the mode of DNA binding by the HINa domain.The structure reveals the presence of two oligosaccharide/nucleotide-binding(OB)folds with a unique DNA-binding surface.HINa uses loop L45 of the canonical OB2 fold to bind to the DNA backbone.The dsDNA is recognized as two single strands of DNA.Interestingly,deletion of HINb compromises the ability of IFI16 to induce IFN-b,while HINa mutants impaired in DNAbinding enhance the production of IFN-b.These results shed light on the roles of IFI16 HIN domains in DNA recognition and innate immune responses. | Xiangmin Ni Heng Ru Feng Ma Lixia Zhao Neil Shaw Yingang Feng Wei Ding Weibin Gong Qiaofeng Wang Songying Ouyang Genhong Cheng Zhi-Jie Liu | 2016 | Journal of Molecular Cell Biology2016，8，1： | 1 |
| 7 | Design of single vertical tube falling - film evaporation basing on ex- periment 显示文摘 | Chao Luo Weibin Ma Yulie Gong | 2011 | Journal of Loss Prevention in the Process Industries2011，24，： | 1 |
| 8 | Thermodynamic comparison of different types of geothermal power plant systems and case studies in China 显示文摘 | Luo Chao Huang Lichang Gong Yulie Ma Weibin | 2012 | Renewable Energy2012，48，： | 1 |
| 9 | Experimental study on vibration characteristics of Luqiao transition section of high speed railway显示文摘 | MA Weibin HAN Zili ZHU Zhonglin | 2009 | Journal of Geotechnical Engineering2009，31，1： | 1 |
| 10 | Preparation of Ammonia Adsorbent by Carbonizing and Activating Mixture of Biomass Material and Hygroscopic Salt显示文摘We put forward a new and ingenious method for the preparation of a new adsorbent by soaking, carbonizing and activating the mixture of hygroscopic salt and biomass material. The new adsorbent has high porosity, uniform distribution and high content of Ca Cl2, and exhibits high adsorption performance. The ammonia uptake and specific cooling power(SCP) at 5 min adsorption time can reach as high as 0.19 g·g-1 and 793.9 W·kg-1, respectively. The concept of utilizing the biomass materials and hygroscopic salts as raw materials for the preparation of adsorbents is of practical interest with respect to the potential quantity of biomass materials around the world, indicating that there would be a new market for biomass materials.Key words: biomass material; adsorption system; ammonia; calcium chloride; activated | 龙臻 卜宪标 LU Zhenneng LI Huashan MA Weibin | 2015 | Journal of Wuhan University of Technology(Materials Science)2015，30，2： | 1 |
| 11 | A sterol 14-demethylase is required lr conidiation, virulence and for mediating sensitivity to sterol demethylation inhibitors by the rice blast fungus Magnaporthe o'zae 显示文摘 | Yan Xia Ma Weibin Li Ya | 2011 | Fungal Genet Biol2011，48，2： | 1 |
| 12 | Small extracellular vesicles with nanomorphology memory promote osteogenesis显示文摘Nanotopographical cues endow biomaterials the ability to guide cell adhesion, proliferation, and differentiation. Cellular mechanical memory can maintain the cell status by retaining cellular information obtained from past mechanical microenvironments. Here, we propose a new concept “morphology memory of small extracellular vesicles (sEV)” for bone regeneration. We performed nanotopography on titanium plates through alkali and heat (Ti8) treatment to promote human mesenchymal stem cell (hMSC) differentiation. Next, we extracted the sEVs from the hMSC, which were cultured on the nanotopographical Ti plates for 21 days (Ti8-21-sEV). We demonstrated that Ti8-21-sEV had superior pro-osteogenesis ability in vitro and in vivo. RNA sequencing further confirmed that Ti8-21-sEV promote bone regeneration through osteogenic-related pathways, including the PI3K-AKT signaling pathway, MAPK signaling pathway, focal adhesion, and extracellular matrix-receptor interaction. Finally, we decorated the Ti8-21-sEV on a 3D printed porous polyetheretherketone scaffold. The femoral condyle defect model of rabbits was used to demonstrate that Ti8-21-sEV had the best bone ingrowth. In summary, our study demonstrated that the Ti8-21-sEV have memory function by copying the pro-osteogenesis information from the nanotopography. We expect that our study will encourage the discovery of other sEV with morphology memory for tissue regeneration. | Liang Ma Wencan Ke Zhiwei Liao Xiaobo Feng Jie Lei Kun Wang Bingjin Wang Gaocai Li Rongjin Luo Yunsong Shi Weifeng Zhang Yu Song Weibin Sheng Cao Yang | 2022 | Bioactive Materials2022，7，11： | 1 |
| 13 | Design of single vertical tube falling film evaporator base on experiment 显示文摘 | Luo Chao Ma Weibin Gong Yulie | 2011 | Journal of Loss Prevention in the Process Industries2011，24，： | 1 |
| 14 | Effect of Forest Management Measures on Soil Respiration and Its Mechanism显示文摘Global warming is one of the hottest environment problems.One of the reasons is the sharp increase of CO2 in atmosphere.Soil respiration in forest ecosystems accounts to 60%-90%of total ecosystem respiration and is therefore one of the key components of the global C cycle.This paper summarized different responses of soil respiration to forest management measures,and described the relevant researches at home and abroad on the effect of management measures like harvesting,forest fertilization,soil improving(Liming),litter removal, and prescribed burning on soil respiration. | Wang Xiyang Ma Lvyi Jia Zhongkui Liu Jie You Weibin Zhang Tiantian | 2012 | Chinese Forestry Science and Technology2012，11，3： | 0 |
| 15 | Composite adsorbents of CaCI2 and sawdust prepared by carbonization for ammonia adsorption refrigeration显示文摘 | Huashan LI Xianbiao BU Lingbao WANG Zhenneng LU Weibin MA | 2012 | Frontiers in Energy2012，6，4： | 0 |
| 16 | Multi-sensor control for precise assembly of optical components显示文摘In order to perform an optical assembly accurately, a multi-sensor control strategy is developed which includes an attitude measurement system, a vision system, a loss measurement system and a force sensor. A 3-DOF attitude measuring method using linear variable differential transformers(LVDT) is designed to adjust the relation of position and attitude between the spherical mirror and the resonator. A micro vision feedback system is set up to extract the light beam and the diaphragm, which can achieve the coarse positioning of the spherical mirror in the optical assembly process. A rapid self-correlation method is presented to analyze the spectrum signal for the fine positioning. In order to prevent the damage of the optical components and realize sealing of the resonator, a hybrid force-position control is constructed to control the contact force of the optical components. The experimental results show that the proposed multi-sensor control strategy succeeds in accomplishing the precise assembly of the optical components, which consists of parallel adjustment, macro coarse adjustment, macro approach, micro fine adjustment, micro approach and optical contact. Therefore, the results validate the multi-sensor control strategy. | Ma Li Rong Weibin Sun Lining | 2014 | Chinese Journal of Aeronautics2014，27，3： | 0 |
| 17 | Variation of Environmental Factors and Dominant Population Succession of Microalgae Planktonic in Closed Shrimp Pond显示文摘In order to investigate the influence of season changes of environmental factors in closed shrimp ponds on the community structure of planktonic microalgae,this paper conducted isolated tests to the temperature,pH,total nitrogen( TN),total phosphorus( TP) and chlorophyll a in the shrimp culture ponds,analyzed the planktonic microalgae community structure and changes of dominant species in water over the same period,with the aim to explain the responses of microalgae community to changes of environmental factors in the pond without foreign water sources.The results showed that pond water temperature and TP content gradually increased from April to the end of September and then declined in October; water pH first decreased and then increased; TN and chlorophyll a first increased and then decreased.The dominant species in the pond were Cyclotella sp.,Navicula sp.,Oocystis borgei and S.quadricauda in the early stage( Apirl-May),Chlamydomonas sp.,Chlorella sp.,S.quadricauda,Golenkinia radiata and Pseudanabeanain in medium stage( June-July),Microcystis,Pseudanabeana,Chlorella sp.And S.quadricaudain in the mid-late stage( August-September),Microcystis,Pseudanabeana,Oscillatoria sp.and Chlorella sp.in the late stage( October-December),and Chlorella sp.,Golenkinia radiate,S.quadricauda in the last stage.Diatoms and green algae were the dominant species in the early stage when the water had low temperature,low N and P nutrition but high N/P and a certain salinity.With the increase of temperature,water desalination and accumulation of N and P nutrition,algae became the dominant species.Cyanobacteria became the strong dominant stages in the mid-late stage when the water had high temperature in the state of eutrophication,and there were also some green algae which were fond of high temperature and had resistant to pollution.In the late stage,cyanobacteria were the absolute dominant stage,but with the decrease of water temperature in the last stage,green algae became the dominant species,and planktonic microalgae biomass in the pool decreased. | Jiaxiong CHEN Weibin LI Weizhou CHEN Qingtao MA Kailiang CHEN | 2018 | Agricultural Biotechnology2018，7，6： | 0 |
| 18 | Nuclear phylogeny and insights into wholegenome duplications and reproductive development of Solanaceae plants显示文摘Solanaceae,the nightshade family,have2700 species,including the important crops potato and tomato,ornamentals,and medicinal plants.Several sequenced Solanaceae genomes show evidence for wholegenome duplication(WGD),providing an excellent opportunity to investigate WGD and its impacts.Here,we generated 93 transcriptomes/genomes and combined them with 87 public datasets,for a total of 180 Solanaceae species representing all four subfamilies and 14 of 15 tribes.Nearly 1700 nuclear genes from these transcriptomic/genomic datasets were used to reconstruct a highly resolved Solanaceae phylogenetic tree with six major clades.The Solanaceae tree supports four previously recognized subfamilies(Goetzeioideae,Cestroideae,Nicotianoideae,and Solanoideae)and the designation of three other subfamilies(Schizanthoideae,Schwenckioideae,and Petunioideae),with the placement of several previously unassigned genera.We placed a Solanaceae-specific whole-genome triplication(WGT1)at81 million years ago(mya),before the divergence of Schizanthoideae from other Solanaceae subfamilies at73 mya.In addition,we detected two gene duplication bursts(GDBs)supporting proposed WGD events and four other GDBs.An investigation of the evolutionary histories of homologs of carpel and fruit developmental genes in 14 gene(sub)families revealed that 21 gene clades have retained gene duplicates.These were likely generated by the Solanaceae WGT1 and may have promoted fleshy fruit development.This study presents a well-resolved Solanaceae phylogeny and a new perspective on retained gene duplicates and carpel/fruit development,providing an improved understanding of Solanaceae evolution. | Jie Huang Weibin Xu Junwen Zhai Yi Hu Jing Guo Caifei Zhang Yiyong Zhao Lin Zhang Christopher Martine Hong Ma Chien-Hsun Huang | 2023 | Plant Communications2023，4，4： | 0 |
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