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| 1 | A novel m6A reader Prrc2a controls oligodendroglial specification and myelination显示文摘While N6-methyladenosine (m6A), the most abundant internal modification in eukaryotic mRNA, is linked to cell differentiation and tissue development, the biological significance of m6A modification in mammalian glial development remains unknown. Here, we identify a novel m6A reader, Prrc2a (Proline rich coiled-coil 2A), which controls oligodendrocyte specification and myelination. Nestin-Cre-mediated knockout of Prrc2a induces significant hypomyelination, decreased lifespan, as well as locomotive and cognitive defects in a mouse model. Further analyses reveal that Prrc2a is involved in oligodendrocyte progenitor cells (OPCs) proliferation and oligodendrocyte fate determination. Accordingly, oligodendroglial-lineage specific deletion of Prrc2a causes a similar phenotype of Nestin-Cre-mediated deletion. Combining transcriptome-wide RNA-seq, m6A-RIP-seq and Prrc2a RIP-seq analysis, we find that Olig2 is a critical downstream target gene of Prrc2a in oligodendrocyte development. Furthermore, Prrc2a stabilizes Olig2 mRNA through binding to a consensus GGACU motif in the Olig2 CDS (coding sequence) in an m6A-dependent manner. Interestingly, we also find that the m6A demethylase, Fto, erases the m6A modification of Olig2 mRNA and promotes its degradation. Together, our results indicate that Prrc2a plays an important role in oligodendrocyte specification through functioning as a novel m6A reader. These findings suggest a new avenue for the development of therapeutic strategies for hypomyelination-related neurological diseases. | Rong Wu Ang Li Baofa Sun Jian-Guang Sun Jinhua Zhang Ting Zhang Yusheng Chen Yujie Xiao Yuhao Gao Qingyang Zhang Jun Ma Xin Yang Yajin Liao Wei-Yi Lai Xiaolong Qi Shukun Wang Yousheng Shu Hai-Lin Wang Fengchao Wang Yun-Gui Yang Zengqiang Yuan | 2019 | Cell Research2019，29，1： | 32 |
| 2 | The apricot(Prunus armeniaca L.)genome elucidates Rosaceae evolution and beta-carotenoid synthesis显示文摘Apricots,scientifically known as Prunus armeniaca L,are drupes that resemble and are closely related to peaches or plums.As one of the top consumed fruits,apricots are widely grown worldwide except in Antarctica.A high-quality reference genome for apricot is still unavailable,which has become a handicap that has dramatically limited the elucidation of the associations of phenotypes with the genetic background,evolutionary diversity,and population diversity in apricot.DNA from P.armeniaca was used to generate a standard,size-selected library with an average DNA fragment size of~20 kb.The library was run on Sequel SMRT Cells,generating a total of 16.54 Gb of PacBio subreads(N50=13.55 kb).The high-quality P.armeniaca reference genome presented here was assembled using long-read single-molecule sequencing at approximately 70×coverage and 171×Illumina reads(40.46 Gb),combined with a genetic map for chromosome scaffolding.The assembled genome size was 221.9 Mb,with a contig NG50 size of 1.02 Mb.Scaffolds covering 92.88%of the assembled genome were anchored on eight chromosomes.Benchmarking Universal Single-Copy Orthologs analysis showed 98.0%complete genes.We predicted 30,436 protein-coding genes,and 38.28%of the genome was predicted to be repetitive.We found 981 contracted gene families,1324 expanded gene families and 2300 apricot-specific genes.The differentially expressed gene(DEG)analysis indicated that a change in the expression of the 9-cis-epoxycarotenoid dioxygenase(NCED)gene but not lycopene beta-cyclase(LcyB)gene results in a lowβ-carotenoid content in the white cultivar“Dabaixing”.This complete and highly contiguous P.armeniaca reference genome will be of help for future studies of resistance to plum pox virus(PPV)and the identification and characterization of important agronomic genes and breeding strategies in apricot. | Fengchao Jiang Junhuan Zhang Sen Wang Li Yang Yingfeng Luo Shenghan Gao Meiling Zhang Shuangyang Wu Songnian Hu Haoyuan Sun Yuzhu Wang | 2019 | Horticulture Research2019，6，1： | 9 |
| 3 | Diurnal dynamics of soil respiration and the influencing factors for three land-cover types in the hinterland of the Taklimakan Desert,China显示文摘Knowledge of soil respiration and the influencing factors in desert ecosystems is essential to understanding carbon dynamics and responses of biotic and abiotic processes in soils to climate change. In this study, soil respiration rate(R_s) for three land-cover types(shifting sandy land, sandy land with straw checkerboard barriers, and shelter forest land) in the hinterland of the Taklimakan Desert was measured in May 2015 using an automated soil CO_2 flux system. The effects of soil temperature(T_s) and soil water content(W_s) on R_s were also analyzed. The results showed that R_s values in shifting sandy land, sandy land with straw checkerboard barriers, and shelter forest land were all low and exhibited obvious diurnal fluctuations. The establishment of straw checkerboard barriers in sandy land had no significant effect on R_s, while the establishment of shelterbelts significantly increased R_s. Shifting sandy land and sandy land with straw checkerboard barriers were carbon sinks at night and early morning and were carbon sources in the daytime, while shelter forest land always acted as a carbon source during the whole day. The synergistic effect of T_s and W_s could better explain the diurnal dynamics in R_s than single factor. In shifting sandy land and sandy land with straw checkerboard barriers, W_s was identified as a limiting factor influencing the diurnal dynamics of R_s. Furthermore, a relatively strong hysteresis loop existed between R_s and T_s. In contrast, in shelter forest land, R_s was significantly influenced by T_s, and a relatively weaker hysteresis loop existed between R_s and W_s. | YANG Fan ALI Mamtimin ZHENG Xinqian HE Qing YANG Xinghua HUO Wen LIANG Fengchao WANG Shaoming | 2017 | Journal of Arid Land2017，9，4： | 7 |
| 4 | Molecular kinetic theory of boundary slip on textured surfaces by molecular dynamics simulations显示文摘A theoretical model extended from the Frenkel-Eyring molecular kinetic theory(MKT)was applied to describe the boundary slip on textured surfaces.The concept of the equivalent depth of potential well was adopted to characterize the solid-liquid interactions on the textured surfaces.The slip behaviors on both chemically and topographically textured surfaces were investigated using molecular dynamics(MD)simulations.The extended MKT slip model is validated by our MD simulations under various situations,by constructing different complex surfaces and varying the surface wettability as well as the shear stress exerted on the liquid.This slip model can provide more comprehensive understanding of the liquid flow on atomic scale by considering the influence of the solid-liquid interactions and the applied shear stress on the nano-flow.Moreover,the slip velocity shear-rate dependence can be predicted using this slip model,since the nonlinear increase of the slip velocity under high shear stress can be approximated by a hyperbolic sine function. | WANG LiYa WANG FengChao YANG FuQian WU HengAn | 2014 | Science China(Physics,Mechanics & Astronomy)2014，57，11： | 4 |
| 5 | Rice GLUTATHIONE PEROXIDASE1-mediated oxidation of bZIP68 positively regulates ABA-independent osmotic stress signaling显示文摘Osmotic stress caused by drought and high salinity is a significant environmental threat that limits plant growth and agricultural yield. Redox regulation plays an important role in plant stress responses, but the mechanisms by which plants perceive and transduce redox signals are still underexplored. Here, we report a critical function for the thiol peroxidase GPX1 in osmotic stress response in rice, where it serves as a redox sensor and transducer. GPX1 is quickly oxidized upon exposure to osmotic stress and forms an intramolecular disulfide bond, which is required for the activation of bZIP68, a VRE-like basic leucine zipper (bZIP) transcription factor involved in the ABA-independent osmotic stress response pathway. The disulfide exchange between GPX1 and bZIP68 induces homo-tetramerization of bZIP68 and thus positively regulates osmotic stress response by regulating osmotic-responsive gene expression. Furthermore, we discovered that the nuclear translocation of GPX1 is regulated by its acetylation under osmotic stress. Taken together, our findings not only uncover the redox regulation of the GPX1-bZIP68 module during osmotic stress but also highlight the coordination of protein acetylation and redox signaling in plant osmotic stress responses. | Heng Zhou Feng Zhang Fengchao Zhai Ye Su Ying Zhou Zhenglin Ge Priyadarshini Tilak Jürgen Eirich Iris Finkemeier Ling Fu Zongmin Li Jing Yang Wenbiao Shen Xingxing Yuan Yanjie Xie | 2022 | Molecular Plant2022，15，4： | 2 |
| 6 | Optical and electrical properties of a spiral LED filament显示文摘This paper introduces a new type of spiral white light-emitting diodes(WLED) filament with high luminous efficiency and uniform optical performance. The optical and thermal properties of the flexible filament were investigated at different stretching heights, namely 0, 1, 2, and 3 cm. The results indicated that the filament showed the best optical characteristics at the stretching height of 2 cm, because of good heat dissipation. In addition, the radiation temperature of the filament was inversely proportional to the output luminous flux. The reliability of the filament at a stretching height of 2 cm was also evaluated after 1000 h of use. The result demonstrated that the luminous flux decay of the bulb was only 0.85%. The flexible spiral WLED filament exhibiting high luminous flux and good reliability could be adapted to promote industrial development in the near future. | Liping Wang Jun Zou Bobo Yang Wenbo Li Yang Li Mingming Shi Wei Zhu Canyun Zhang Fengchao Wang Yujie Lin | 2018 | Journal of Semiconductors2018，39，2： | 2 |
| 7 | Size Effect on the Coalescence-Induced Self-Propelled Droplet 显示文摘 | WANG Fengchao YANG Fuqian ZHAO Yapu | 2011 | Applied Physics Letters2011，98，05： | 1 |
| 8 | Early Cretaceous A-type Granites in the Dandong Area,NE China and its Geodynamical Implications显示文摘A-type granites,as an important petrologic sign to build up environmental recognition,were mainly formed in extensional tectonic settings.A biotite syenogranite from the Fenghuangshan pluton in Dandong,Liaoning Province gave SHRIMP zircon U-Pb ages of 122.5±1.6 Ma,124.9±1.7 Ma and 126.9±1.1 Ma.The monzogranites have SHRIMP zircon U-Pb ages of 118.2±1.6 Ma,128.1±1.7 Ma and 131.6±1.9 Ma,giving an emplacement age for the pluton in the Early Cretaceous.SiO_(2) is 65.48-74.49 wt%,whereas that of K_(2)O is 4.16-6.44 wt%,and that of Na_(2)O is 2.99-4.70 wt%.They also contain 13.24-15.76 wt% of Al_(2)O_(3),with an A/CNK ratio of 0.92-1.10,averaging 1.02.The alkalinity rate(AR)ranges from 2.68 to 5.12,and this range is within the AR of peraluminous type rocks.The granites of Fenghuangshan pluton are characterized by high contents of Na and K and low contents of Ca(thermophile element)and Mg,which are features of A-type granites.The(Na_(2)O+K_(2)O)-Fe_(2)O_(3)^(*)×5-(CaO+MgO)×5 discrimination diagram also shows that Fenghuangshan pluton is an A2-type granite.The above granite has zircon ε_(Hf)(t)values ranging from-17.06 to-9.09,with single-stage Hf model ages(T_(DM))of 1141 Ma to 1498 Ma and two-stage Hf crustal model ages(T_(DM)^(C))of 1762 Ma to 2263Ma.A comprehensive analysis suggests that the Fenghuangshan pluton might have been formed from the lithospheric-plate sliding during the late stages of evolution of hot rift structures and might have been closely associated with the tectonic settings of Mesozoic Eurasia and the ancient Pacific Plate. | SONG Yunhong HAO Libo YANG Fengchao ZHAO Dongfang ZHANG Zhehuan | 2021 | Acta Geologica Sinica(English Edition)2021，95，5： | 1 |
| 9 | Aged hematopoietic stem cells entrap regulatory T cells to create a prosurvival microenvironment显示文摘Although DNA mutation drives stem cell aging,how mutation-accumulated stem cells obtain clonal advantage during aging remains poorly understood.Here,using a mouse model of irradiation-induced premature aging and middle-aged mice,we show that DNA mutation accumulation in hematopoietic stem cells(HSCs)during aging upregulates their surface expression of major histocompatibility complex class II(MHCII).MHCII upregulation increases the chance for recognition by bone marrow(BM)-resident regulatory T cells(Tregs),resulting in their clonal expansion and accumulation in the HSC niche.On the basis of the establishment of connexin 43(Cx43)-mediated gap junctions,BM Tregs transfer cyclic adenosine monophosphate(cAMP)to aged HSCs to diminish apoptotic priming and promote their survival via activation of protein kinase A(PKA)signaling.Importantly,targeting the HSC–Treg interaction or depleting Tregs effectively prevents the premature/physiological aging of HSCs.These findings show that aged HSCs use an active self-protective mechanism by entrapping local Tregs to construct a prosurvival niche and obtain a clonal advantage. | Weinian Liao Chaonan Liu Ke Yang Jun Chen Yiding Wu Shuzhen Zhang Kuan Yu Lisha Wang Li Ran Mo Chen Fang Chen Yang Xu Song Wang Fengchao Wang Qian Zhang Jinghong Zhao Lilin Ye Changhong Du Junping Wang | 2023 | Cellular & Molecular Immunology2023，20，10： | 0 |
| 10 | Mup-knockout mice generated through CRISPR/ Cas9-mediated deletion for use in urinary protein analysis显示文摘主要尿蛋白质(MUP ) 是在老鼠尿的最丰富的蛋白质种类,为超过 90% 全部的蛋白质内容的财务。21 Mup 基因和 21 pseudogenes 在染色体 4 上在约 2 megabase 对(Mbp ) 的一个区域被聚类。一个 Mup 大美人老鼠模型将极大地在老鼠尿的 proteomic 分析的领域里便于研究。这里,我们用 CRISPR/Cas9 系统报导 2.2 Mbp 的 Mup 基因簇的成功的大美人。同型结合的 Mup 大美人老鼠幸存到成人生活并且没展出明显的缺点。non-MUP 的 proteomes 的模式在同型结合的 Mup 大美人老鼠的尿蛋白质类似于钠 dodecyl 硫酸盐 polyacrylamide 胶化电气泳动判定的野类型的老鼠的那些。连接酶的 immunosorbent 试金的敏感显著地在 Mup 大美人提高了老鼠检测尿蛋白质是的 non-MUP。简言之,我们开发了一个 Mup 大美人老鼠模型。这个老鼠模型将是有用的因为测试那的尿 biomarker 的研究可以为人有关联。 | Haixia Yang Wei Zhang Shan Lu Guangqing Lu Hongjuan Zhang Yinghua Zhuang Yue Wang Mengqiu Dong Yu Zhang Xingang Zhou Peng Wang Lei Yu Fengchao Wang Liang Chen | 2016 | Acta Biochimica et Biophysica Sinica2016，48，5： | 0 |
| 11 | Long-term exposure to fine particulate matter modifies the association between physical activity and hypertension incidence显示文摘Background:The trade-off between the benefits of regular physical activity(PA)and the potentially detrimental effects of augmented exposure to air pollution in highly polluted regions remains unclear.This study aimed to examine whether ambient fine particulate matter(PM_(2.5))exposure modified the impacts of PA volume and intensity on hypertension risk.Methods:We included 54,797 participants without hypertension at baseline in a nationwide cohort of the Prediction for Atherosclerotic Cardiovascular Disease Risk in China(China-PAR)project.PA volume and intensitywere assessed by questionnaire,and high-resolution(1 km×1 km)PM_(2.5)estimates were generated using a satellite-based model.Results:During 413,516 person-years of follow-up,12,100 incident hypertension cases were identified.PM_(2.5)significantly modified the relationship between PA and hypertension incidence(p_(interaction)<0.001).Increased PA volume was negatively associated with incident hypertension in the low PM_(2.5)stratum(<59.8μg/m^(3),ptrend<0.001),with a hazard ratio of 0.81(95%confidence interval(95%CI):0.74-0.88)when comparing the fourth with the first quartile of PA volume.However,the health benefits were not observed in the high PM_(2.5)stratum(≥59.8μg/m^(3),p_(trend)=0.370).Moreover,compared with light PA intensity,vigorous intensity was related to a 20%(95%CI:9%-29%)decreased risk of hypertension for participants exposed to low PM_(2.5),but a 17%(95%CI:4%-33%)increased risk for those with high PM_(2.5)levels.Conclusion:PA was associated with a reduced risk of hypertension only among participants with low PM_(2.5)exposure.Our findings recommended regular PA to prevent hypertension in less polluted regions and reinforced the importance of air quality improvement. | Qiong Liu Keyong Huang Fengchao Liang Xueli Yang Jianxin Li Jichun Chen Xiaoqing Liu Jie Cao Chong Shen Ling Yu Yingxin Zhao Ying Deng Ying Li Dongsheng Hu Xiangfeng Lu Yang Liu Dongfeng Gu Fangchao Liu Jianfeng Huang | 2022 | Journal of Sport and Health Science2022，11，6： | 0 |
| 12 | Direct cytoplasm delivery of gold nanoparticles for real-time apoptosis detection显示文摘Gold nanoparticles(AuNPs)assembled with fluorescent peptides through Au-S bonds(pep-AuNPs)have been widely used in biomolecular detection.However,due to the endo/lysosomal trapping after the nanoprobes enter cells,the direct delivery of AuNP probes into the cytoplasm for real-time imaging remains a difficult barrier for many cytoplasm-targeting agents.Here,we prepare AuNP@gel by wrapping a multi-functional nanogel structure on the surface of a single AuNP probe by in-situ polymerization in order to directly deliver AuNP probes into the cell cytoplasm.Compared with the pep-AuNP probes,which are trapped inside lysosomes for long periods,the AuNP@gel probes use the proton-sponge effect to effectively disrupt endo/lysosomal membranes and remain in the cytoplasm.In addition,the AuNP@gel probes rapidly escape from endo/lysosomes to avoid the complex environment that interferes with the stability of the AuNP probes and the lysosomal-storage trigger the upregulation of oxidative stress into the cells.The nanogel structure enables the AuNP probes to avoid some detrimental effects and to achieve high-fidelity fluorescence signals in the cells.Compared to traditional strategies for lysosomal escape,this one-step in-situ polymerization procedure avoids the complicated modification of additional ligands and is generally applicable to peptide-,DNA-,and polymerlinked AuNP probes. | Qiang Li Fengchao Wang Jie Yang Dingbin Liu | 2020 | Nano Research2020，13，3： | 0 |
| 13 | Mup-knockout mice generated through CRISPR/Cas9-mediated deletion for use in urinary protein analysis显示文摘The originally published version of this manuscript contained incomplete funding information. The funding information has since been updated to read as follows. | Haixia Yang Wei Zhang Shan Lu Guangqing Lu Hongjuan Zhang Yinghua Zhuang Yue Wang Mengqiu Dong Yu Zhang Xingang Zhou Peng Wang Lei Yu Fengchao Wang Liang Chen | 2019 | Acta Biochimica et Biophysica Sinica2019，51，6： | 0 |
| 14 | Fine-tuned mesoporous covalent organic frameworks for highly efficient low molecular-weight proteins separation显示文摘Covalent organic frameworks(COFs)are prominent porous materials for molecules separation due to their desirable structures.However,very few COFs are reported for the separation of macromolecules such as low molecular-weight(MW)proteins.Here,two stable mesoporous COFs(Azo-COF and Tp-COF)with highly crystallized frameworks are synthesized,and their pore sizes are slightly-regulated via elaborate selection of pyrene knots and amino linkages.Benefiting from the pore size difference less than 4 ?,the tandem utilization of these two COFs exhibits efficiently size-selective separation ability towards low MW proteins cytochrome c and myoglobin with small MW difference of 2 kDa,in which protein adsorption possibilities are verified by computational calculations together with confocal laser scanning microscopy(CLSM).Furthermore,a simple COF-based separation device is designed and prepared to achieve effective and low-consumption proteins separation.This work has offered an optimized synthetic strategy for fine-tuned mesoporous COFs and expanded their applications on macromolecules separation. | Tienan Wang Irfan Azhar Yuting Yang Yao Lu Yuyang Tian Nan Gao Fengchao Cui Li Yang Xiaofei Jing Guangshan Zhu | 2022 | Nano Research2022，15，5： | 0 |
| 15 | Using selenium-conjugated polyethylene glycol to enhance the stability of gold nanoparticles in biologically relevant samples显示文摘Using stabilizing agents to maintain the physicochemical properties of colloids in complex environments is crucial for their realworld applications. In this article, we describe how selenium-(Se-) terminated polyethylene glycol(PEG) can serve as a highaffinity stabilizing agent for gold nanoparticles(AuNPs). Compared to Au NPs modified with standard thiolated PEG(S-PEG),Se-PEG-coated Au NPs are much more stable under extreme conditions such as high/low pH, high salt content, and high temperatures. We demonstrate that the Se anchor can prevent the dissociation of PEG ligands from Au NP surfaces in living cells,where a higher concentration of biothiols is usually present. These results indicate that Se-PEG is an excellent stabilizing agent that may facilitate further studies on metal NPs for various complex and physiological systems. | Yang Xue Bo Dong Xuehui Liu Fengchao Wang Jie Yang Dingbin Liu | 2019 | Science China Chemistry2019，62，2： | 0 |
| 16 | RNF219 interacts with CCR4-NOT in regulating stem cell differentiation显示文摘Regulation of RNA stability plays a crucial role in gene expression control.Deadenylation is the initial rate-limiting step for the majority of RNA decay events.Here,we show that RING finger protein 219(RNF219)interacts with the CCR4-NOT deadenylase complex.RNF219-CCR4-NOT exhibits deadenylation activity in vitro.RNA-seq analyses identify some of the 2-cell-specific genes and the neuronal genes significantly downregulated upon RNF219 knockdown,while upregulated after depletion of the CCR4-NOT subunit CNOTIO in mouse embryonic stem(ES)cells.RNF219 depletion leads to impaired neuronal lineage commitment during ES cell differentiation.Our study suggests that RNF219 is a novel interacting partner of CCR4-NOT and required for maintenance of ES cell pluripotency. | Hao Du Chen Chen Yan Wang Yang Yang Zhuanzhuan Che Xiaoxu Liu Siyan Meng Chenghao Guo Manman Xu Haitong Fang Fengchao Wang Chengqi Lin Zhuojuan Luo | 2020 | Journal of Molecular Cell Biology2020，12，11： | 0 |
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