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| 1 | Rational development of a human antibody cocktail that deploys multiple functions to confer Pan-SARS-CoVs protection显示文摘Structural principles underlying the composition and synergistic mechanisms of protective monoclonal antibody cocktails are poorly defined.Here,we exploited antibody cooperativity to develop a therapeutic antibody cocktail against SARS-CoV-2.On the basis of our previously identified humanized cross-neutralizing antibody H014,we systematically an a lyzed a fully human n aive antibody library and rationally identified a potent neutralizing antibody partner,P17,which confers effective protection in animal model.Cryo-EM studies dissected the nature of the P17 epitope,which is SARS-CoV-2 specific and distinctly different from that of HOI4.High-resolution structure of the SARS-CoV-2 spike in complex with HOM and P17,together with functional investigations revealed that in a two-antibody cocktail,synergistic neutralization was achieved by S1 shielding and conformational locking,thereby blocking receptor attachment and viral membrane fusion,conferring high potency as well as robustness against viral mutation escape.Furthermore,cluster analysis identified a hypothetical 3rd antibody partner for further reinforcing the cocktail as pan-SARS-CoVs therapeutics. | Hangping Yao Yao Sun Yong-Qiang Deng Nan Wang Yongcong Tan Na-Na Zhang Xiao-Feng Li Chao Kong Yan-Peng Xuc Qi Chen Tian-Shu Cao Hui Zhao Xintian Yan Lei Cao Zhe Lv Dandan Zhu Rui Feng Nanping Wu Wenhai Zhang Yuhao Hu Keda Chen Rong-Rong Zhang Qingyu Lv Shihui Sun Yunhua Zhou Run Yan Guan Yang Xinglu Chanjuan Liu Xiangyun Lu Linfang Cheng Hongying Qiu Xing-Yao Huang Tianhao Weng Danrong Shi Weidong Jiang Junbin Shao Lei Wang Jie Zhang Tao Jiang Guojun Lang Cheng-Feng Qinc Lanjuan Li Xiangxi Wang | 2021 | Cell Research2021，31，1： | 5 |
| 2 | A comprehensive analysis of the Bencao(herbal)small RNA Atlas reveals novel RNA therapeutics for treating human diseases显示文摘Cross-kingdom herbal mi RNA was first reported in 2012.Using a modified herbal extraction protocol,we obtained 73,677,287sequences by RNA-seq from 245 traditional Chinese Medicine(TCM),of which 20,758,257 were unique sequences.We constructed a Bencao(herbal)small RNA(s RNA)Atlas(http://gffzz4a3adbfa122d4a47hvbcppncwvnvv6wqc.ffgz.tsg.suse.edu.cn),annotated the sequences by sequence-based clustering,and created a nomenclature system for Bencao s RNAs.The profiles of 21,757 mi RNAs in the Atlas were highly consistent with those of plant mi RNAs in mi RBase.Using software tools,our results demonstrated that all human genes might be regulated by s RNAs from the Bencao s RNA Atlas,part of the predicted human target genes were experimentally validated,suggesting that Bencao s RNAs might be one of the main bioactive components of herbal medicines.We established roadmaps for oligonucleotide drugs development and optimization of TCM prescriptions.Moreover,the decoctosome,a lipo-nano particle consisting of 0.5%–2.5%of the decoction,demonstrated potent medical effects.We propose a Bencao(herbal)Index,including small-molecule compounds(SM),protein peptides(P),nucleic acid(N),non-nucleic and non-proteinogenic large-molecule compounds(LM)and elements from Mendeleev's periodic table(E),to quantitatively measure the medical effects of botanic medicine.The Bencao s RNA Atlas is a resource for developing gene-targeting oligonucleotide drugs and optimizing botanical medicine,and may provide potential remedies for the theory and practice of one medicine. | Yinghao Cao Yexuan Lin Na Sun Xinyi Du Yixin Dong Song Mei Xingyu Deng Xiaobei Li Shaoting Guo Kegong Tang Jiaqi Liu Xiangyu Qiao Dandan Zhao Yuhao Qin Cong Zhang Tianyi Xin Xiaohu Shi Congzhao Zhou Tao Dong De-an Guo Benedikt MKessler Dong Xu Jingyuan Song Fengming Huang Xiaoyue Wang Chengyu Jiang | 2023 | Science China(Life Sciences)2023，66，10： | 2 |
| 3 | DEAP1 encodes a fasciclin-like arabinogalactan protein required for male fertility in rice显示文摘Arabinogalactan proteins(AGPs)are widely distributed in plant cells.Fasciclin-like AGPs(FLAs)belong to a subclass of AGPs that play important roles in plant growth and development.However,little is known about the biological functions of rice FLA.Herein,we report the identification of a male-sterile mutant of DEFECTIVE EXINE AND APERTURE PATTERNING1(DEAP1)in rice.The deap1 mutant anthers produced aberrant pollen grains with defective exine formation and a flattened aperture annulus and exhibited slightly delayed tapetum degradation.DEAP1 encodes a plasma membrane-associated member of groupⅢplant FLAs and is specifically and temporally expressed in reproductive cells and the tapetum layer during male development.Gene expression studies revealed reduced transcript accumulation of genes related to exine formation,aperture patterning,and tapetum development in deap1 mutants.Moreover,DEAP1 may interact with two rice D6 PROTEIN KINASE-LIKE3 s(OsD6PKL3s),homologs of a known Arabidopsis aperture protein,to affect rice pollen aperture development.Our findings suggested that DEAP1 is involved in male reproductive development and may affect exine formation and aperture patterning,thereby providing new insights into the molecular functions of plant FLAs in male fertility. | Dan Zhou Ting Zou Kaixuan Zhang Pingping Xiong Fuxing Zhou Hao Chen Gongwen Li Kaiyou Zheng Yuhao Han Kun Peng Xu Zhang Shangyu Yang Qiming Deng Shiquan Wang Jun Zhu Yueyang Liang Changhui Sun Xiumei Yu Huainian Liu Lingxia Wang Ping Li Shuangcheng Li | 2022 | Journal of Integrative Plant Biology2022，64，7： | 2 |
| 4 | Optimal tool replacement decision method based on cost and process capability显示文摘 | DENG Yuhao ZHU Haiping ZHANG Guojun | 2012 | Advances in Intelligent and Soft Computing2012，125，： | 1 |
| 5 | Sub-THz signals' propagation model in hypersonic plasma sheath under different atmospheric conditions显示文摘One of the aims for modern hypersonic cruise flight is hypersonic global reach. The length of route for such flights could be up to thousands of kilometers. The atmospheric conditions on the route are complicated. On the other hand, hypersonic flights used to suffer from communication blackout. The sub-THz communication is considered as a potential solution to the ‘blackout'. In the present study the propagation for sub-THz signals in hypersonic plasma sheaths was modeled under different atmospheric conditions. According to the study, the electron density and the electron collision frequency near the onboard antenna linearly increase with the atmospheric mass density around the vehicle, hence the attenuation of sub-THz signals in hypersonic plasma sheaths increases with the atmospheric mass density. The impact led by the atmospheric temperature is ignorable. Based on the study a new sub-THz signals' propagation model was developed, which could be utilized for quick estimation for signal propagation under different atmospheric conditions. The geographical difference of signal propagation over the whole globe was obtained with the new model. The results showed that the signal attenuation in plasma sheaths varies with latitude and longitude. The maximum signal attenuation occurs in Alaska, Canada and Russia. | Kai YUAN Yuhao WANG Linfang SHEN Ming YAO Xiaohua DENG Fuhui ZHOU Zhou CHEN | 2017 | Science China(Information Sciences)2017，60，11： | 0 |
| 6 | Method for the extraction of circulating nucleic acids based on MOF reveals cell-free RNA signatures in liver cancer显示文摘Cell-free RNA(cf RNA) allows assessment of health, status, and phenotype of a variety of human organs and is a potential biomarker to non-invasively diagnose numerous diseases. Nevertheless, there is a lack of highly efficient and bias-free cf RNA isolation technologies due to the low abundance and instability of cf RNA.Here, we developed a reproducible and high-efficiency isolation technology for different types of cell-free nucleic acids(containing cf RNA and viral RNA) in serum/plasma based on the inclusion of nucleic acids by metal-organic framework(MOF) materials, which greatly improved the isolation efficiency and was able to preserve RNA integrity compared with the most widely used research kit method. Importantly, the quality of cf RNA extracted by the MOF method is about 10-fold that of the kit method, and the MOF method isolates more than three times as many different RNA types as the kit method. The whole transcriptome mapping characteristics of cf RNA in serum from patients with liver cancer was described and a cf RNA signature with six cf RNAs was identified to diagnose liver cancer with high diagnostic efficiency(area under curve = 0.905 in the independent validation cohort) using this MOF method. Thus, this new MOF isolation technique will advance the field of liquid biopsy, with the potential to diagnose liver cancer. | Yuqing Sun Haixin Yu Shaoqing Han Ruoxi Ran Ying Yang Yongling Tang Yuhao Wang Wenhao Zhang Heng Tang Boqiao Fu Boshi Fu Xiaocheng Weng Song-Mei Liu Hexiang Deng Shuang Peng Xiang Zhou | 2024 | National Science Review2024，11，1： | 0 |
| 7 | Genome‑wide DNA methylation and transcriptome analyses reveal the key gene for wool type variation in sheep显示文摘Background Wool fibers are valuable materials for textile industry.Typical wool fibers are divided into medullated and non-medullated types,with the former generated from primary wool follicles and the latter by either primary or secondary wool follicles.The medullated wool is a common wool type in the ancestors of fine wool sheep before breeding.The fine wool sheep have a non-medullated coat.However,the critical period determining the type of wool follicles is the embryonic stage,which limits the phenotypic observation and variant contrast,making both selection and studies of wool type variation fairly difficult.Results During the breeding of a modern fine(MF)wool sheep population with multiple-ovulation and embryo transfer technique,we serendipitously discovered lambs with ancestral-like coarse(ALC)wool.Whole-genome rese-quencing confirmed ALC wool lambs as a variant type from the MF wool population.We mapped the significantly associated methylation locus on chromosome 4 by using whole genome bisulfite sequencing signals,and in turn identified the SOSTDC1 gene as exons hypermethylated in ALC wool lambs compare to their half/full sibling MF wool lambs.Transcriptome sequencing found that SOSTDC1 was expressed dozens of times more in ALC wool lamb skin than that of MF and was at the top of all differentially expressed genes.An analogy with the transcriptome of coarse/fine wool breeds revealed that differentially expressed genes and enriched pathways at postnatal lamb stage in ALC/MF were highly similar to those at the embryonic stage in the former.Further experiments validated that the SOSTDC1 gene was specifically highly expressed in the nucleus of the dermal papilla of primary wool follicles.Conclusion In this study,we conducted genome-wide differential methylation site association analysis on differen-tial wool type trait,and located the only CpG locus that strongly associated with primary wool follicle development.Combined with transcriptome analysis,SOSTDC1 was identified as the only gene at this locus that was specifically overexpressed in the primary wool follicle stem cells of ALC wool lamb skin.The discovery of this key gene and its epigenetic regulation contributes to understanding the domestication and breeding of fine wool sheep. | Jiankui Wang Guoying Hua Ganxian Cai Yuhao Ma Xue Yang Letian Zhang Rui Li Jianbin Liu Qing Ma Keliang Wu Yaofeng Zhao Xuemei Deng | 2023 | Journal of Animal Science and Biotechnology2023，14，6： | 0 |
| 8 | Caution About Truncation-By-Death in Clinical Trial Statistical Analysis:A Lesson from Remdesivir显示文摘In an effort to combat coronavirus disease 2019(COVID-19)caused by severe acute respiratory syndrome coronavirus 2(SARS-CoV-2),clinicians across the globe have been working tirelessly to find effective treatments.In 2020,inspiring drug trials have focused on treating COVID-19 with the antiviral drug remdesivir.Beigel et al. | Yuhao Deng Xiao-Hua Zhou | 2021 | China CDC weekly2021，3，25： | 0 |
| 9 | Comparative analysis on gas–solid drag models in MFIX-DEM simulations of bubbling fluidized bed显示文摘In this study,the open-source software MFIX-DEM simulations of a bubbling fluidized bed(BFB)are applied to assess nine drag models according to experimental and direct numerical simulation(DNS)results.The influence of superficial gas velocity on gas–solid flow is also examined.The results show that according to the distribution of time-averaged particle axial velocity in y direction,except for Wen–Yu and Tenneti–Garg–Subramaniam(TGS),other drag models are consistent with the experimental and DNS results.For the TGS drag model,the layer-by-layer movement of particles is observed,which indicates the particle velocity is not correctly predicted.The time domain and frequency domain analysis results of pressure drop of each drag model are similar.It is recommended to use the drag model derived from DNS or fine grid computational fluid dynamics–discrete element method(CFD-DEM)data first for CFD-DEM simulations.For the investigated BFB,the superficial gas velocity less than 0.9 m·s^(-1) should be adopted to obtain normal hydrodynamics. | Ruiyu Li Xiaole Huang Yuhao Wu Lingxiao Dong Srdjan Beloševic Aleksandar Milicevic Ivan Tomanovic Lei Deng Defu Che | 2023 | Chinese Journal of Chemical Engineering2023，64，12： | 0 |
| 10 | Lightweight Cross-Modal Multispectral Pedestrian Detection Based on Spatial Reweighted Attention Mechanism显示文摘Multispectral pedestrian detection technology leverages infrared images to provide reliable information for visible light images, demonstrating significant advantages in low-light conditions and background occlusion scenarios. However, while continuously improving cross-modal feature extraction and fusion, ensuring the model’s detection speed is also a challenging issue. We have devised a deep learning network model for cross-modal pedestrian detection based on Resnet50, aiming to focus on more reliable features and enhance the model’s detection efficiency. This model employs a spatial attention mechanism to reweight the input visible light and infrared image data, enhancing the model’s focus on different spatial positions and sharing the weighted feature data across different modalities, thereby reducing the interference of multi-modal features. Subsequently, lightweight modules with depthwise separable convolution are incorporated to reduce the model’s parameter count and computational load through channel-wise and point-wise convolutions. The network model algorithm proposed in this paper was experimentally validated on the publicly available KAIST dataset and compared with other existing methods. The experimental results demonstrate that our approach achieves favorable performance in various complex environments, affirming the effectiveness of the multispectral pedestrian detection technology proposed in this paper. | Lujuan Deng Ruochong Fu Zuhe Li Boyi Liu Mengze Xue Yuhao Cui | 2024 | Computers, Materials & Continua2024，78，3： | 0 |
| 11 | Direct synthesis of high-quality perovskite nanocrystals on a flexible substrate and deterministic transfer显示文摘Solid-state perovskite nanocrystals are promising coherent light sources, as there is optical feedback within the crystal structure. In order to utilize the high performance of perovskites for on-chip applications, or observe new physical phenomena, these crystals must be integrated with pre-fabricated electronic or photonic structures. However, the material's fragility has made the deterministic transfer a great challenge thus far. Here, we report the first deterministic transfer of perovskite nanocrystals with sub-micron accuracy. Cesium lead halide(CsPbI_3) nanocrystals were directly synthesized on flexible polydimethylsiloxane(PDMS) stamps via chemical vapor deposition(CVD) and subsequently transferred onto arbitrary substrates/structures. We demonstrated the transfer of a CsPbI_3 crystalline nanoplate(NP)onto an 8 mm fiber core and achieved single-mode whispering gallery mode lasing. Our method can be extended to a variety of other arbitrary substrates(e.g., electrodes, photonic structures, micromechanical systems), laying the foundations for previously unattainable opportunities in perovskites-based devices. | Yilun Wang Xing Cheng Kai Yuan Yi Wan Pan Li Yuhao Deng Haoran Yu Xiaolong Xu Yi Zeng Wanjin Xu Yanping Li Renmin Ma Kenji Watanabe Takashi Taniguchi Yu Ye Lun Dai | 2018 | Science Bulletin2018，63，23： | 0 |
| 12 | Recent Advances in Cadmium Sulfide-Based Photocatalysts for Photocatalytic Hydrogen Evolution显示文摘High-efficiency photocatalytic hydrogen evolution(PHE)relies on the development of inexpensive,stable,and efficient photocatalysts.Cadmium sulfide(CdS),as a typical binary metal sulfide,has attracted considerable research attention due to its negative conduction band position,narrow band gap for visible-light response,and strong driving force for PHE.However,the construction of CdSbased photocatalysts and the PHE rate still require improvement for practical applications.In this review,recent advances in CdS-based photocatalysts for PHE via water splitting are systematically summarized.First,the semiconductor properties of CdS,including the crystal and band structures,are briefly introduced.Afterward,the fundamental mechanisms of PHE using semiconductor photocatalysts via water splitting are discussed.Subsequently,the photoactivity of bare CdS with different morphologies and structures,CdS with cocatalyst loading,and CdS-based heterojunction photocatalysts are reviewed and discussed in detail.Finally,the challenges and prospects for exploring advanced CdS-based photocatalysts are provided. | Xinlong Zheng Yuhao Liu Yuqi Yang Yiming Song Peilin Deng Jing Li Weifeng Liu Yijun Shen Xinlong Tian | 2023 | Renewables2023，1，1： | 0 |
| 13 | Digital Forensic Analysis on Runtime Instruction Flow显示文摘 | Li Juanru Gu Dawu Deng Chaoguo Luo Yuhao | 2010 | China Communications2010，7，6： | 0 |
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