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| 1 | Head-related transfer function database and its analyses显示文摘Based on the measurements from 52 Chinese subjects (26 males and 26 females), a high-spatial-resolution head-related transfer function (HRTF) database with corre- sponding anthropometric parameters is established. By using the database, cues relating to sound source localization, including interaural time difference (ITD), interaural level difference (ILD), and spectral features introduced by pinna, are analyzed. Moreover, the statistical relationship between ITD and anthropometric parameters is estimated. It is proved that the mean values of maximum ITD for male and female are significantly different, so are those for Chinese and western sub- jects. The difference in ITD is due to the difference in individual anthropometric parameters. It is further proved that the spectral features introduced by pinna strongly depend on individual; while at high frequencies (f≥ 5.5 kHz), HRTFs are left-right asymmetric. This work is instructive and helpful for the research on bin- aural hearing and applications on virtual auditory in future. | XIE BoSun ZHONG XiaoLi RAO Dan LIANG ZhiQiang | 2007 | Science China(Physics,Mechanics & Astronomy)2007，50，3： | 10 |
| 2 | MicroTom Metabolic Network: Rewiring Tomato Metabolic Regulatory Network throughout the Growth Cycle显示文摘Tomato(Solanum lycopersicum)is a major horticultural crop worldwide and has emerged as a preeminent model for metabolic research.Although many research efforts have focused on the analysis of metabolite differences between varieties and species,the dynamics of metabolic changes during the tomato growth cycle and the regulatory networks that underlie these changes are poorly understood.In this study,we integrated high-resolution spatio-temporal metabolome and transcriptome data to systematically explore the metabolic landscape across 20 major tomato tissues and growth stages.In the resulting MicroTom Metabolic Network,the 540 detected metabolites and their co-expressed genes could be divided into 10 distinct clusters based on their biological functions.Using this dataset,we constructed a global map of the major metabolic changes that occur throughout the tomato growth cycle and dissected the underlying regulatory network.In addition to verifying previously well-established regulatory networks for important metabolites,we identified novel transcription factors that regulate the biosynthesis of important secondary metabolites such as steroidal glycoalkaloids and flavonoids.Our findings provide insights into spatiotemporal changes in tomato metabolism and generate a valuable resource for the study of metabolic regulatory processes in model plants. | Yan Li Yang Chen Lu Zhou Shengjie You Heng Deng Ya Chen Saleh Alseekh Yong Yuan Rao Fu Zixin Zhang Dan Su Alisdair R.Fernie Mondher Bouzayen Tao Ma Mingchun Liu Yang Zhang | 2020 | Molecular Plant2020，13，8： | 10 |
| 3 | Infliximab protects against pulmonary emphysema in smoking rats显示文摘 | ZHANG Xiang-yan ZHANG Cheng SUN Qian-yun LI Dan LUO Rong-rong WAN Zi-fen YE Xian-wei LIU Wei-jia RAO Shan-shan HAN Jing | 2011 | Chinese Medical Journal2011，，16： | 8 |
| 4 | TIM-1 acts a dual-attachment receptor for Ebolavirus by interacting directly with viral GP and the PS on the viral envelope显示文摘Ebolavirus 能与 50%90% 的死亡率在人引起出血性的发烧。当前,没有同意的疫苗和抗病毒的治疗是可得到的。人的 TIM1 为 EBOV 被看作一个附件因素,提高通过和位于病毒的信封的 PS 的相互作用的病毒的感染。然而,推理由 filovirus 位于 hTIM-1,然而并非另外的 PS 有约束力的受体的更好的用法下面,未知的遗体。我们第一在 vitro 表明了在 hTIM-1 和 EBOV GP 之间的一个直接相互作用并且决定了 hTIM-1 和 hTIM-4 的 Ig V 领域的水晶结构。在到 EBOV GP 的 hTIM-1 的有约束力的区域被怪物和变化试金印射,它基于结构的分析被设计。象点异种一样用 hTIM-1 和它的相当或相同的事物执行的 Pseudovirion 感染试金在 EBOV 细胞的入口验证了 GP 有约束力的地点和 EBOV GP-hTIM-1 相互作用的重要性的地点。 | Shuai Yuan Lei Cao Hui Ling Minghao Dang Yao Sun Xuyuan Zhang Yutao Chen Liguo Zhang Dan Su Xiangxi Wang Zihe Rao | 2015 | Protein & Cell2015，6，11： | 6 |
| 5 | Architecture of the herpesvirus genomepackaging complex and implications for DNA translocation显示文摘Genome packaging is a fundamental process in a viral life cycle and a prime target of antiviral drugs.Herpesviruses use an ATP-driven packaging motor/terminase complex to translocate and cleave concatemeric dsDNA into procapsids but its molecular architecture and mechanism are unknown.We report atomic structures of a herpesvirus hexameric terminase complex in both the apo and ADP·BeF3-bound states.Each subunit of the hexameric ring comprises three components-the ATPase/terminase pUL15 and two regulator/fixer proteins,pUL28 and pUL33-unlike bacteriophage terminases.Distal to the nuclease domains,six ATPase domains form a central channel with conserved basicpatches conducive to DNA binding and trans-acting arginine fingers are essential to ATP hydrolysis and sequential DNA translocation.Rearrangement of the nuclease domains mediated by regulatory domains converts DNA translocation mode to cleavage mode.Our structures favor a sequential revolution model for DNA translocation and suggest mechanisms for concerted domain rearrangements leading to DNA cleavage. | Yunxiang Yang Pan Yang Nan Wang Zhonghao Chen Dan Su ZHong Zhou Zihe Rao Xiangxi Wang | 2020 | Protein & Cell2020，11，5： | 5 |
| 6 | Crystal structure of the African swine fever virus structural protein p35 reveals its role for core shell assembly显示文摘Dear Editor,The African swine fever(ASF)is a highly contagious hemorrhagic and lethal disease in domestic pigs.The ASF outbreaks of in many Asia countries,including China,Vietnam,Mongolia,and South Korea,have posed a huge threat to the pig indusry.In the attempt to stop ASF from spreading further in China's Mainland,more than 10 million pigs have been culled since August 2018.The causative agent for ASF is a DNA virus,African swine fever virus(ASFV).Although this deadly disease has been reported in Kenya nearly one hundred years ago,there has been no vaccine for protection from ASFV infection or effective treatments to cure ASF until now. | Guobang Li Dan Fu Guangshun Zhang Dongming Zhao Mingyu Li Xue Geng Dongdong Sun Yuhui Wang Cheng Chen Peng Jiao Lin Cao Yu Guo Zihe Rao | 2020 | Protein & Cell2020，11，8： | 3 |
| 7 | Structure of African swine fever virus p15 reveals its dual role for membrane-association and DNA binding显示文摘Dear Editor, African swine fever (ASF) is a highly contagious disease of domestic pigs caused by African swine fever virus (ASFV),with mortality rates approaching 90%-100%.The first ASF case was described in 1921 in Kenya.Over the past decades, ASF has spread from Sub-Saharan Africa to Europe and Asia, and pose a huge threat to global food safety.Since the first ASF case reported in August 2018, more than 10 million pigs had been culled in China at an enormous economic loss.The risk of ASFV mutating to infect humans is extremely low.However, ASF not only threatens food security but also severely strikes the world economy in many fields, such as the global supply of the blood thinner heparin,most of which is produced from pigs.Hence, ASF is a strictly monitored infectious animal disease by OIE (World Organization for Animal Health), unfortunately, there is no approved drug or vaccine against this lethal viral disease. | Dan Fu Dongming Zhao Wei Zhang Guangshun Zhang Mingyu Li Zheng Zhang Yuhui Wang Dongdong Sun Peng Jiao Cheng Chen Yu Guo Zihe Rao | 2020 | Protein & Cell2020，11，8： | 3 |
| 8 | Evaluating the Brewer–Dobson circulation and its responses to ENSO,QBO,and the solar cycle in different reanalyses显示文摘This study compares the climatology and long-term trend of northern winter stratospheric residual mean meridional circulation(RMMC), as well as its responses to El Ni?o-Southern Oscillation(ENSO), stratospheric Quasi Biennial Oscillation(QBO), and solar cycle in ten reanalyses and a stratosphere-resolving model, CESM1-WACCM. The RMMC is a large-scale meridional circulation cell in the stratosphere, usually referred to as the estimate of the Brewer Dobson circulation(BDC). The distribution of the BDC is generally consistent among multiple reanalyses except that the NOAA twentieth century reanalysis(20RC) largely underestimates it. Most reanalyses(except ERA40 and ERA-Interim) show a strengthening trend for the BDC during 1979–2010. All reanalyses and CESM1-WACCM consistently reveal that the deep branch of the BDC is significantly enhanced in El Ni?o winters as more waves from the troposphere dissipate in the stratospheric polar vortex region. A secondary circulation cell is coupled to the temperature anomalies below the QBO easterly center at 50 hPa with tropical upwelling/cooling and midlatitude downwelling/warming, and similar secondary circulation cells also appear between 50–10 hPa and above 10 hPa to balance the temperature anomalies. The direct BDC response to QBO in the upper stratosphere creates a barrier near 30°N to prevent waves from propagating to midlatitudes, contributing to the weakening of the polar vortex. The shallow branch of the BDC in the lower stratosphere is intensified during solar minima, and the downwelling warms the Arctic lower stratosphere. The stratospheric responses to QBO and solar cycle in most reanalyses are generally consistent except in the two 20 CRs. | Jian Rao YueYue Yu Dong Guo ChunHua Shi Dan Chen DingZhu Hu | 2019 | Earth and Planetary Physics2019，3，2： | 3 |
| 9 | EAST-Educational Adaptive-optics Solar Telescope显示文摘For the public having a better understanding of solar activities,the Educational Adaptive-optics Solar Telescope(EAST)was built in July 2021 and is located at the Shanghai Astronomy Museum.The EAST consists of a 65 cm aperture solar telescope with a 177-element adaptive optics system and two-channel high resolution imaging system at the Hαand TiO bands,in addition to three full disk solar telescopes at CaK,Hαand TiO bands equipped on the tube of the main telescope.In this paper,the configuration of the EAST is described.Its performance and on-sky observational results are presented.The EAST,to our knowledge,is the most advanced solar telescope for the popularization of science in the world.Due to its excellent performance,the data acquired by the EAST can also be used for research on solar physics and space weather prediction. | Changhui Rao Xuejun Rao Zhimao Du Hua Bao Cheng Li Jinlong Huang Youming Guo Libo Zhong Qing Lin Xin Ge Jinsheng Yang Xinlong Fan Yangyi Liu Dan Jia Xin Li Mei Li Ming Zhang Yuntao Cheng Jiahui Zhou Jiawen Yao Lanqiang Zhang Naiting Gu | 2022 | Research in Astronomy and Astrophysics2022，22，6： | 3 |
| 10 | BRD2 induces drug resistance through activation of the RasGRP1/Ras/ERK signaling pathway in adult T-cell lymphoblastic lymphoma显示文摘Background:Adult patients with T-cell lymphoblastic lymphoma(T-LBL)are treated with high-intensity chemotherapy regimens,but the response rate is still unsatisfactory because of frequent drug resistance.We aimed to investigate the potential mechanisms of drug resistance in adults with T-LBL.Methods:Gene expression microarray was used to identify differential mRNA expression profiles between chemotherapy-resistant and chemotherapy-sensitive adult T-LBL tissues.Real-time PCR and immunohistochemistry were performed to detect the expression of bromodomain-containing protein 2(BRD2)and c-Myc in fresh-frozen T-LBL tissues from 85 adult patients.The Ras pull-down assay was performed to monitor Ras activation.Chromatin immunoprecipitation assays were used to analyze the binding of E2F transcription factor 1(E2F1)/BRD2 to the RAS guanyl releasing protein 1(RasGRP1)promoter region.The drug resistance effect and mechanism of BRD2 were determined by both in vivo and in vitro studies.Results:A total of 86 chemotherapy resistance-related genes in adult T-LBL were identified by gene expression microarray.Among them,BRD2 was upregulated in chemotherapy-resistant adult T-LBL tissues and associated with worse progressionfree survival and overall survival of 85 adult T-LBL patients.Furthermore,BRD2 suppressed doxorubicin(Dox)-induced cell apoptosis both in vitro and in vivo.The activation of RasGRP1/Ras/ERK signaling might contribute to the Dox resistance effect of BRD2.Besides,OTX015,a bromodomain and extra-terminal(BET)inhibitor,reversed the Dox resistance effect of BRD2.Patient-derived tumor xenograft demonstrated that the sequential use of OTX015 after Dox showed superior therapeutic effects.Conclusions:Our data showed that BRD2 promotes drug resistance in adult T-LBL through the RasGRP1/Ras/ERK signaling pathway.Targeting BRD2 may be a novel strategy to improve the therapeutic efficacy and prolong survival of adults with TLBL. | Xiao-Peng Tian Jun Cai Shu-Yun Ma Yu Fang Hui-Qiang Huang Tong-Yu Lin Hui-Lan Rao Mei Li Zhong-Jun Xia Tie-Bang Kang Dan Xie Qing-Qing Cai | 2020 | Cancer Communications2020，40，6： | 3 |
| 11 | Implementation and evaluation of parallel FFT on Engineering and Scientific Computation Accelerator (ESCA) architecture显示文摘The fast Fourier transform (FFT) is a fundamental kernel of many computation-intensive scientific applications.This paper deals with an implementation of the FFT on the accelerator system,a heterogeneous multi-core architecture to accelerate computation-intensive parallel computing in scientific and engineering applications.The Engineering and Scientific Computation Accelerator (ESCA) consists of a control unit and a single instruction multiple data (SIMD) processing element (PE) array,in which PEs communicate with each other via a hierarchical two-level network-on-chip (NoC) with high bandwidth and low latency.We exploit the architecture features of ESCA to implement a parallel FFT algorithm efficiently.Experimental results show that both the proposed parallel FFT algorithm and the ESCA architecture are scalable.The 16-bit fixed-point parallel FFT performance of ESCA is compared with a published work to prove the superiority of the mapping algorithm and the hardware architecture.The floating-point parallel FFT performances of ESCA are evaluated and compared with those of the IBM Cell processor and GPU to demonstrate the computing power of the ESCA system for high performance applications. | Dan WU Xue-cheng ZOU Kui DAI Jin-li RAO Pan CHEN Zhao-xia ZHENG | 2011 | Journal of Zhejiang University-Science C(Computers and Electronics)2011，12，12： | 2 |
| 12 | The experiment study of spatial mask effect显示文摘masker 与 maskee 的理论分析和实验是空间的在方位角的分离证明当 masker 和 maskee 空间地被分开时,阀值趋于到落下和空间揭露的 producethe 现象。结果也证明空间揭露与频率有关。频率越高,空间揭露是越多 stronger。最大的揭露是 15 dB。主要暗示是 masker 和 maskee 什么时候采购原料,空间地在方位角被分开,因为头的影响,单耳的 Signal-to-Mask 比率(SMR ) 将增加相关转移功能(HRTF ) 。同时,由更高听觉的系统的听觉的信息的有两耳的处理是空间揭露的另一个原因。 | XIE Zhiwen YIN Junxun RAO Dan | 2006 | Chinese Journal of Acoustics2006，25，1： | 2 |
| 13 | A trust-based consumer decision-making model in electronic commerce: The role of trust, perceived risk, and their antecedents显示文摘 | Dan J. Kim Donald L. Ferrin H. Raghav Rao | 2007 | Decision Support Systems2007，，2： | 2 |
| 14 | Engineering microparticles based on solidified stem cell secretome with an augmented pro-angiogenic factor portfolio for therapeutic angiogenesis显示文摘Tissue (re)vascularization strategies face various challenges, as therapeutic cells do not survive long enough in situ, while the administration of pro-angiogenic factors is hampered by fast clearance and insufficient ability to emulate complex spatiotemporal signaling. Here, we propose to address these limitations by engineering a functional biomaterial capable of capturing and concentrating the pro-angiogenic activities of mesenchymal stem cells (MSCs). In particular, dextran sulfate, a high molecular weight sulfated glucose polymer, supplemented to MSC cul-tures, interacts with MSC-derived extracellular matrix (ECM) components and facilitates their co-assembly and accumulation in the pericellular space. Upon decellularization, the resulting dextran sulfate-ECM hybrid material can be processed into MIcroparticles of SOlidified Secretome (MIPSOS). The insoluble format of MIPSOS protects protein components from degradation, while facilitating their sustained release. Proteomic analysis demonstrates that MIPSOS are highly enriched in pro-angiogenic factors, resulting in an enhanced pro-angiogenic bioactivity when compared to naïve MSC-derived ECM (cECM). Consequently, intravital microscopy of full-thickness skin wounds treated with MIPSOS demonstrates accelerated revascularization and healing, far superior to the ther-apeutic potential of cECM. Hence, the microparticle-based solidified stem cell secretome provides a promising platform to address major limitations of current therapeutic angiogenesis approaches. | Thomas Spater Marisa Assunçao Kwok Keung Lit Guidong Gong Xiaoling Wang Yi-Yun Chen Ying Rao Yucong Li Chi Him Kendrick Yiu Matthias W.Laschke Michael D.Menger Dan Wang Rocky S.Tuan Kay-Hooi Khoo Michael Raghunath Junling Guo Anna Blocki | 2022 | Bioactive Materials2022，7，11： | 1 |
| 15 | Head-related transfer function database and its analyses显示文摘 | XIE Bosun ZHONG Xiaoli RAO Dan | 2006 | Science in China Series G :Physics Mechanics & Astronomy2006，36，5： | 1 |
| 16 | A multidimensional trust formation model in B-to-C e-commerce: a conceptual framework and content analyses of academia/practitioner perspectives显示文摘 | Dan J. Kim Yong I. Song S.B. Braynov H.R. Rao | 2004 | Decision Support Systems2004，，2： | 1 |
| 17 | Identification of benzofuran central cores for the inhibition of leukotriene A 4 hydrolase显示文摘 | Wendy Eccles Jonathan M. Blevitt Jamila N. Booker Christa C. Chrovian Shelby Crawford Aimee Rose de Leon Xiaohu Deng Anne M. Fourie Cheryl A. Grice Krystal Herman Lars Karlsson Aaron M. Kearney Alice Lee-Dutra Jimmy Liang Rosa Luna Dan Pippel Navin Rao Ja | 2012 | Bioorganic & Medicinal Chemistry Letters2012，，： | 1 |
| 18 | 查看详情显示文摘 | Rao C.N.R Behera J.N Dan M | | 0，，： | 1 |
| 19 | 采用常压室温等离子体诱变技术获得一株高产雄甾-4-烯-3,17-二酮的突变菌株Mycobacterium neoaurum ZADF-4(英文)显示文摘目的:获得一株高产雄甾-4-烯-3,17-二酮(AD)的Mycobacterium neoaurum突变株。创新点:获得了一株3-甾酮-Δ1-脱氢酶(KSDD)酶活缺陷型的高产AD的诱变菌株Mycobacterium neoaurum ZADF-4,并采用菌落显色法筛选KSDD酶活缺陷型M.neoaurum突变株。方法:(1)诱变方法:采用常压室温等离子体(ARTP)诱变技术来处理出发菌株M.neoaurum ZAD。ARTP诱变条件如下:功率40 W,气流量12.5 L/min,辐射距离1 cm,样品体积10μl,辐射时间为60、90、120、150和180 s;致死率统计优化后,最适辐射时间为150 s,致死率为90%~96%。(2)筛选方法:将ARTP诱变处理后的菌株点种在硝酸纤维滤膜上,30°C培养2 d,然后将长有菌落的滤膜小心取出并漂浮在4 mg/ml二氯靛酚(DCPIP)溶液(0.1 mmol/L磷酸缓冲液p H 7.0),30°C培养1 d直到全部菌落染成蓝色。然后将该滤膜取出,漂浮在250 mmol/L AD溶液(2%甲醇和50 mmol/L Tris p H 7.0缓冲液),室温放置15 min左右,观察菌落颜色变化。KSDD在底物AD存在时会脱氢产生雄甾-1,4-二烯-3,17-二酮(ADD)和H+,H+可以使被DCPIP染成蓝色的菌株褪色。因此,酶活缺陷型的菌株会仍保持蓝色,而酶活高的菌株会褪色为黄色(图3)。(3)对获得的潜在的高产AD菌株进行进一步的酶活检测以及产量验证,以期获得最优的突变株。结论:获得了4株具有潜在的高产AD能力的菌株,其中,最优的突变株ZADF-4的KSDD酶活相较于出发菌株ZAD下降了81.2%(图4),活性胶也证明其KSDD酶活相较于出发菌株下降明显(图5)。薄层色谱法(TLC)和高效液相色谱法(HPLC)实验证明突变株ZADF-4中,AD的产量有了明显的提高(图6和图7),提高到了(6.28±0.11)g/L,AD/ADD提高到8:1,AD的摩尔产率达到60.3%(表1)。对出发菌株ZAD和突变株ZADF-4的ksdd基因进行克隆和序列比对,发现ZADF-4的ksdd序列在5'端缺失9个核苷酸(atgttctac),导致3个氨基酸(MFY)的缺失;还发生了两个点突变,其中一个是无义突变(g.15a>6t),另一个是有义突变(g.413c>404t),并引起了相应位置上的氨基酸变化(p.138S>135L)。上述的基因突变及其引起的氨基酸序列的变化可能是引起M.neoaurum ZADF-4中KSDD酶活降低及AD产量提高的主要原因。 | Chao LIU Xian ZHANG Zhi-ming RAO Ming-long SHAO Le-le ZHANG Dan WU Zheng-hong XU Hui LI | 2015 | Journal of Zhejiang University-Science B(Biomedicine & Biotechnology)2015，16，4： | 1 |
| 20 | A building-up process in open-framework metal carboxylates that involves a progressive increase in dimensionality显示文摘 | Dan M Rao C N R | 2006 | Angew Chem Int Ed2006，45，： | 1 |
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